RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 RHBDL2Q9NX52 303 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 ABRACLQ9P1F3 81 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 ZNF736B4DX44 427 aaPredicted RBP17.4■□□□□ 0.38
SCN1B-206ENST00000638536 FCGR3AP08637 254 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 CD3GP09693 182 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 RAB7AP51149 207 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 HERPUD1Q15011 391 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 CDNFQ49AH0 187 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 HIST2H2BDQ6DRA6 164 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 LYG1Q8N1E2 194 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 RTN4IP1Q8WWV3 396 aaPredicted RBP17.4■□□□□ 0.38
SCN1B-206ENST00000638536 ABHD14AQ9BUJ0 271 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 NPFFR1Q9GZQ6 430 aa17.4■□□□□ 0.38
SCN1B-206ENST00000638536 SH2D7A6NKC9 451 aaPredicted RBP17.39■□□□□ 0.38
SCN1B-206ENST00000638536 GAPDHP04406 335 aaKnown RBP17.39■□□□□ 0.38
SCN1B-206ENST00000638536 AMY1AP04745 511 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 AMY2AP04746 511 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 ARHGDIBP52566 201 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 ZNF137PP52743 207 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 MOB3BQ86TA1 216 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 OR8H3Q8N146 312 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 OR4C13Q8NGP0 309 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 SLC25A33Q9BSK2 321 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 MRPS26Q9BYN8 205 aaKnown RBP17.39■□□□□ 0.38
SCN1B-206ENST00000638536 SLC23A1Q9UHI7 598 aa17.39■□□□□ 0.38
SCN1B-206ENST00000638536 NBEAL1Q6ZS30 2694 aa17.39■□□□□ 0.37
SCN1B-206ENST00000638536 IGKV1D-8A0A087WSZ0 117 aa17.39■□□□□ 0.37
SCN1B-206ENST00000638536 HNF4GQ14541 408 aa17.39■□□□□ 0.37
SCN1B-206ENST00000638536 STEAP3Q658P3 488 aa17.39■□□□□ 0.37
SCN1B-206ENST00000638536 IZUMO1Q8IYV9 350 aa17.39■□□□□ 0.37
SCN1B-206ENST00000638536 RBM14Q96PK6 669 aaKnown RBP17.39■□□□□ 0.37
SCN1B-206ENST00000638536 RANBP3Q9H6Z4 567 aaPredicted RBP17.39■□□□□ 0.37
SCN1B-206ENST00000638536 SERPINE3A8MV23 424 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 TRDCB7Z8K6 153 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 ST8SIA5O15466 376 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 IGKV1D-33P01593 117 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 IGKV1-33P01594 117 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 OR3A3P47888 321 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 ALDH3B2P48448 385 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 SERPINB10P48595 397 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 ZNF260Q3ZCT1 412 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 IFI27L2Q9H2X8 130 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.38■□□□□ 0.37
SCN1B-206ENST00000638536 SERTAD4Q9NUC0 356 aa17.38■□□□□ 0.37
SCN1B-206ENST00000638536 MGAM2Q2M2H8 2515 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 TMEM235A6NFC5 223 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 OR2F2O95006 317 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 GSTT2P0CG29 244 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 GSTT2BP0CG30 244 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 CEACAM6P40199 344 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 ARFRP1Q13795 201 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 CTF1Q16619 201 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 TMEM95Q3KNT9 176 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 IGSF11Q5DX21 431 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 LY6G6FQ5SQ64 297 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 SHISA2Q6UWI4 295 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 THNSL2Q86YJ6 484 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 Q8N2B8 174 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 SPATA2Q9UM82 520 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 ETV7Q9Y603 341 aa17.37■□□□□ 0.37
SCN1B-206ENST00000638536 FAM106CPP0CH98 169 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 IL3RAP26951 378 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 MRPS15P82914 257 aaKnown RBP17.36■□□□□ 0.37
SCN1B-206ENST00000638536 HES1Q14469 280 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 GPR107Q5VW38 600 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 ANKRD13BQ86YJ7 626 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 OR2AK2Q8NG84 335 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 NUDCD2Q8WVJ2 157 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 SLC25A46Q96AG3 418 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 CITED1Q99966 193 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 SCAND1P57086 179 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 HACD4Q5VWC8 232 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 TGIF2LXQ8IUE1 241 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 DTX3Q8N9I9 347 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 OR2T6Q8NHC8 308 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 ABHD14BQ96IU4 210 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 AGMATQ9BSE5 352 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 C11orf54Q9H0W9 315 aaPredicted RBP17.36■□□□□ 0.37
SCN1B-206ENST00000638536 MGAT4AQ9UM21 535 aa17.36■□□□□ 0.37
SCN1B-206ENST00000638536 FBN3Q75N90 2809 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 SAA2-SAA4A0A096LPE2 208 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 FABP7O15540 132 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 SSX5O60225 188 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 RGS11O94810 467 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 GABARAPO95166 117 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 SAA2P0DJI9 122 aaPredicted RBP17.35■□□□□ 0.37
SCN1B-206ENST00000638536 PTHLHP12272 177 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 ZBTB25P24278 435 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 ABCA11PQ4W5N1 156 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 C16orf82Q7Z2V1 217 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 EAF1Q96JC9 268 aaPredicted RBP17.35■□□□□ 0.37
SCN1B-206ENST00000638536 ZNF251Q9BRH9 671 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 PRSS22Q9GZN4 317 aa17.35■□□□□ 0.37
SCN1B-206ENST00000638536 PLXNB1O43157 2135 aa17.34■□□□□ 0.37
SCN1B-206ENST00000638536 TRAV18A0A075B6X5 111 aa17.34■□□□□ 0.37
SCN1B-206ENST00000638536 HSPA12AO43301 675 aa17.34■□□□□ 0.37
SCN1B-206ENST00000638536 LANCL1O43813 399 aa17.34■□□□□ 0.37
SCN1B-206ENST00000638536 TMEM11P17152 192 aa17.34■□□□□ 0.37
SCN1B-206ENST00000638536 EBI3Q14213 229 aa17.34■□□□□ 0.37
SCN1B-206ENST00000638536 RPL39P5Q59GN2 51 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms