RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HAPLN4Q86UW8 402 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 UFSP2Q9NUQ7 469 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 PPP1R3CQ9UQK1 317 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 ARGFXA6NJG6 315 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 IFNA1P01562 189 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 WDR61Q9GZS3 305 aaKnown RBP17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 TMEM9BQ9NQ34 198 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 LOXL2Q9Y4K0 774 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 ZNF407Q9C0G0 2248 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 PHOX2AO14813 284 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 RHBDL1O75783 438 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 TDGF1P13385 188 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 PMS2P11Q13670 270 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 ZNF585BQ52M93 769 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 S100PBPQ96BU1 408 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 STRADBQ9C0K7 418 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 RBM7Q9Y580 266 aaKnown RBP17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 DOCK10Q96BY6 2186 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 FAM90A26D6RGX4 464 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 FGF8P55075 233 aaPredicted RBP17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 PKIAP61925 76 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 ZNF497Q6ZNH5 498 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 SSX7Q7RTT5 188 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 CTDSP1Q9GZU7 261 aa17.04■□□□□ 0.32
SYNGAP1-227ENST00000638142 KMT2EQ8IZD2 1858 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 TRBV24-1A0A075B6N3 115 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 OPN1MWP04001 364 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 OPN1MW2P0DN77 364 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 OPN1MW3P0DN78 364 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 CA6P23280 308 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 CLN3Q13286 438 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 GAMTQ14353 236 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 PDZD11Q5EBL8 140 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 ABHD17BQ5VST6 288 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 DBX2Q6ZNG2 339 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 UBALD2Q8IYN6 164 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 ZPBPQ9BS86 351 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 KCNS2Q9ULS6 477 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 MAP1LC3B2A6NCE7 125 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 IFNA10P01566 189 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 SPINK2P20155 84 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 MAGEA5P43359 124 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 REC114Q7Z4M0 266 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 Q8IYB0 196 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 TTTY12Q9BZ98 90 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 MAP1LC3BQ9GZQ8 125 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 TRAPPC2LQ9UL33 140 aa17.03■□□□□ 0.32
SYNGAP1-227ENST00000638142 FAM166BA8MTA8 275 aa17.02■□□□□ 0.32
SYNGAP1-227ENST00000638142 FABP4P15090 132 aa17.02■□□□□ 0.32
SYNGAP1-227ENST00000638142 OR4C12Q96R67 309 aa17.02■□□□□ 0.32
SYNGAP1-227ENST00000638142 CEBPZOSA8MTT3 80 aa17.02■□□□□ 0.31
SYNGAP1-227ENST00000638142 ZNF16P17020 682 aaPredicted RBP17.02■□□□□ 0.31
SYNGAP1-227ENST00000638142 SPANXN5Q5MJ07 72 aa17.02■□□□□ 0.31
SYNGAP1-227ENST00000638142 PRR18Q8N4B5 295 aa17.02■□□□□ 0.31
SYNGAP1-227ENST00000638142 RHOVQ96L33 236 aa17.02■□□□□ 0.31
SYNGAP1-227ENST00000638142 RTL8AQ9BWD3 113 aa17.02■□□□□ 0.31
SYNGAP1-227ENST00000638142 HES7Q9BYE0 225 aa17.02■□□□□ 0.31
SYNGAP1-227ENST00000638142 TIMM9Q9Y5J7 89 aa17.02■□□□□ 0.31
SYNGAP1-227ENST00000638142 RNF212BA8MTL3 300 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 C3orf80F5H4A9 247 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 ACP1P24666 158 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 NUFIP2Q7Z417 695 aaKnown RBP17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 MCEMP1Q8IX19 187 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 TAF15Q92804 592 aaKnown RBP eCLIP17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 ABI3Q9P2A4 366 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 TRAV39A0A0B4J263 110 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 A0A1W2PR80 420 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 WDR1O75083 606 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 OR2H2O95918 312 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 DDTP30046 118 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 AGMATQ9BSE5 352 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 OR51B6Q9H340 312 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 MBNL3Q9NUK0 354 aaKnown RBP17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 PITPNC1Q9UKF7 332 aa17.01■□□□□ 0.31
SYNGAP1-227ENST00000638142 SIRPB1O00241 398 aa17■□□□□ 0.31
SYNGAP1-227ENST00000638142 SLC38A11Q08AI6 406 aa17■□□□□ 0.31
SYNGAP1-227ENST00000638142 OR1C1Q15619 314 aa17■□□□□ 0.31
SYNGAP1-227ENST00000638142 WDR25Q64LD2 544 aaPredicted RBP17■□□□□ 0.31
SYNGAP1-227ENST00000638142 OR5R1Q8NH85 324 aa17■□□□□ 0.31
SYNGAP1-227ENST00000638142 PACRGQ96M98 296 aaPredicted RBP17■□□□□ 0.31
SYNGAP1-227ENST00000638142 CDH20Q9HBT6 801 aa17■□□□□ 0.31
SYNGAP1-227ENST00000638142 POLDIP2Q9Y2S7 368 aa17■□□□□ 0.31
SYNGAP1-227ENST00000638142 TSTD3H0UI37 97 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 ZXDAP98168 799 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 TMEM14EPQ6UXP3 125 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 DRAM1Q8N682 238 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 TMEM251Q8N6I4 163 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 NANOS1Q8WY41 292 aaKnown RBP16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 HIST1H2BLQ99880 126 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 RBKSQ9H477 322 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 WIPI2Q9Y4P8 454 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 ZNF737O75373 536 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 ELLP55199 621 aaPredicted RBP16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 ERVK11-1P61568 191 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 FGFRL1Q8N441 504 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 OR1K1Q8NGR3 316 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 GP6Q9HCN6 339 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 SLC39A9Q9NUM3 307 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 NAT8Q9UHE5 227 aa16.99■□□□□ 0.31
SYNGAP1-227ENST00000638142 UBE2L5PA0A1B0GUS4 154 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms