RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 RIMS4Q9H426 269 aaPredicted RBP14.97□□□□□ -0.01
CLN6-221ENST00000637494 BLOC1S6Q9UL45 172 aa14.97□□□□□ -0.01
CLN6-221ENST00000637494 TMEM14DPA8MWL7 114 aa14.96□□□□□ -0.01
CLN6-221ENST00000637494 LSAMPQ13449 338 aa14.96□□□□□ -0.01
CLN6-221ENST00000637494 GNMTQ14749 295 aa14.96□□□□□ -0.01
CLN6-221ENST00000637494 HMGN3Q15651 99 aa14.96□□□□□ -0.01
CLN6-221ENST00000637494 CXorf66Q5JRM2 361 aaPredicted RBP14.96□□□□□ -0.01
CLN6-221ENST00000637494 LY6G6FQ5SQ64 297 aa14.96□□□□□ -0.01
CLN6-221ENST00000637494 KLHL30-AS1Q8NEE0 82 aa14.96□□□□□ -0.01
CLN6-221ENST00000637494 NICN1Q9BSH3 213 aa14.96□□□□□ -0.01
CLN6-221ENST00000637494 MGAT4AQ9UM21 535 aa14.96□□□□□ -0.01
CLN6-221ENST00000637494 ZNF736B4DX44 427 aaPredicted RBP14.95□□□□□ -0.02
CLN6-221ENST00000637494 SLC17A2O00624 439 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 CPEP16870 476 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 VDAC1P21796 283 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 CRHBPP24387 322 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 PSMD7P51665 324 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 RPS25P62851 125 aaKnown RBP14.95□□□□□ -0.02
CLN6-221ENST00000637494 UNC119Q13432 240 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 P2RY14Q15391 338 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 MMDQ15546 238 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 RAB11BQ15907 218 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 MGLLQ99685 303 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 ZNF251Q9BRH9 671 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 MCRIP2Q9BUT9 160 aaKnown RBP14.95□□□□□ -0.02
CLN6-221ENST00000637494 ACOT13Q9NPJ3 140 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 PLSCR3Q9NRY6 295 aa14.95□□□□□ -0.02
CLN6-221ENST00000637494 AURKAIP1Q9NWT8 199 aaPredicted RBP14.95□□□□□ -0.02
CLN6-221ENST00000637494 OR5H8P0DN80 308 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 CD37P11049 281 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 CALRP27797 417 aaKnown RBP14.94□□□□□ -0.02
CLN6-221ENST00000637494 MYCNOSP40205 109 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 IZUMO2Q6UXV1 221 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 Q6ZPA2 131 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 C8orf86Q6ZUL3 223 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 ZNF695Q8IW36 515 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 SVOPQ8N4V2 548 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 KCNK15Q9H427 330 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 PIPOXQ9P0Z9 390 aa14.94□□□□□ -0.02
CLN6-221ENST00000637494 AK6Q9Y3D8 172 aaKnown RBP14.94□□□□□ -0.02
CLN6-221ENST00000637494 LINC01548A6NM66 108 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 NAPSAO96009 420 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 THBS3P49746 956 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 F2RL1P55085 397 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 QRFPP83859 136 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 TMEM91Q6ZNR0 172 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 MRPL41Q8IXM3 137 aaKnown RBP14.93□□□□□ -0.02
CLN6-221ENST00000637494 FAM71E2Q8N5Q1 922 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 LINC00482Q8N8I6 264 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 CNBD2Q96M20 576 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 LPAR5Q9H1C0 372 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 KIAA1456Q9P272 454 aa14.93□□□□□ -0.02
CLN6-221ENST00000637494 ZNF107Q9UII5 783 aaPredicted RBP14.93□□□□□ -0.02
CLN6-221ENST00000637494 ERICH4A6NGS2 130 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 HSPA12AO43301 675 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 ELANEP08246 267 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 ACTBP60709 375 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 MRPS15P82914 257 aaKnown RBP14.92□□□□□ -0.02
CLN6-221ENST00000637494 FOXE3Q13461 319 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 FAM71F2Q6NXP2 309 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 ZNF833PQ6ZTB9 187 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 ZNF367Q7RTV3 350 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 NABP2Q9BQ15 211 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 CHCHD6Q9BRQ6 235 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 MRPL20Q9BYC9 149 aaKnown RBP14.92□□□□□ -0.02
CLN6-221ENST00000637494 GHITMQ9H3K2 345 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 HSF4Q9ULV5 492 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 V9GY05 133 aa14.92□□□□□ -0.02
CLN6-221ENST00000637494 SAA2-SAA4A0A096LPE2 208 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 PDCD5O14737 125 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 RAB29O14966 203 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 NBR2O15453 112 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 SOCS1O15524 211 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 SAA2P0DJI9 122 aaPredicted RBP14.91□□□□□ -0.02
CLN6-221ENST00000637494 SLC2A2P11168 524 aaPredicted RBP14.91□□□□□ -0.02
CLN6-221ENST00000637494 ZBTB25P24278 435 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 MAP2K4P45985 399 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 TBCEQ15813 527 aaPredicted RBP14.91□□□□□ -0.02
CLN6-221ENST00000637494 ZNF880Q6PDB4 577 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 C5orf24Q7Z6I8 188 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 ODF3L1Q8IXM7 274 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 OR56B1Q8NGI3 324 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 EDARADDQ8WWZ3 215 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 HSPB9Q9BQS6 159 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 C12orf4Q9NQ89 552 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 ZMAT5Q9UDW3 170 aaKnown RBP14.91□□□□□ -0.02
CLN6-221ENST00000637494 AK3Q9UIJ7 227 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 TGP01266 2768 aa14.91□□□□□ -0.02
CLN6-221ENST00000637494 TRBV6-6A0A0A6YYG2 114 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 IGF1P05019 195 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 RPLP1P05386 114 aaKnown RBP14.9□□□□□ -0.02
CLN6-221ENST00000637494 OR3A3P47888 321 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 VEGFCP49767 419 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 RAB25P57735 213 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 HLA-DRB3P79483 266 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 FABP5Q01469 135 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 TMEM65Q6PI78 240 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 ETV3LQ6ZN32 361 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 FAM89BQ8N5H3 189 aa14.9□□□□□ -0.02
CLN6-221ENST00000637494 OR8U1Q8NH10 309 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms