RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 YPEL1O60688 119 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 CD83Q01151 205 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 C17orf58Q2M2W7 97 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 Q3ZCU0 254 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 SP5Q6BEB4 398 aaPredicted RBP12.69□□□□□ -0.38
CLN6-219ENST00000637329 ZNF818PQ6ZRF7 136 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 KCTD9Q7L273 389 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 LDLRAD3Q86YD5 345 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 ZBTB34Q8NCN2 500 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 YPEL2Q96QA6 119 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 DCTN5Q9BTE1 182 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 BARX1Q9HBU1 254 aaPredicted RBP12.69□□□□□ -0.38
CLN6-219ENST00000637329 OR2S2Q9NQN1 319 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 KCNIP3Q9Y2W7 256 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 ABCA4P78363 2273 aa12.69□□□□□ -0.38
CLN6-219ENST00000637329 PDZD2O15018 2839 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 DBX1A6NMT0 343 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 F5H0A9 414 aaPredicted RBP12.68□□□□□ -0.38
CLN6-219ENST00000637329 FCN3O75636 299 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 LY6HO94772 140 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 GIPP09681 153 aaPredicted RBP12.68□□□□□ -0.38
CLN6-219ENST00000637329 HLA-GP17693 338 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 GPR6P46095 362 aaPredicted RBP12.68□□□□□ -0.38
CLN6-219ENST00000637329 LOXL3P58215 753 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 SRPXP78539 464 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 GNMTQ14749 295 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 AVPI1Q5T686 147 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 ZNF645Q8N7E2 425 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 OR52L2PQ8NGH6 319 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 UBALD1Q8TB05 177 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 CASTOR1Q8WTX7 329 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 RAB39BQ96DA2 213 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 ZNF714Q96N38 554 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 ZNF436Q9C0F3 470 aaPredicted RBP12.68□□□□□ -0.38
CLN6-219ENST00000637329 RANGRFQ9HD47 186 aaPredicted RBP12.68□□□□□ -0.38
CLN6-219ENST00000637329 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 GFOD1Q9NXC2 390 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 IDI2-AS1Q9NZ38 188 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 GNG12Q9UBI6 72 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 ITGB1BP2Q9UKP3 347 aa12.68□□□□□ -0.38
CLN6-219ENST00000637329 NF1P21359 2839 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 A0A1W2PPH5 198 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 RBP4P02753 201 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 CXCL3P19876 107 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 PPP1CCP36873 323 aaKnown RBP12.67□□□□□ -0.38
CLN6-219ENST00000637329 RAB7AP51149 207 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 PHLDA2Q53GA4 152 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 LIN54Q6MZP7 749 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 HEPN1Q6WQI6 88 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 ZNF841Q6ZN19 808 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 C8orf46Q8TAG6 207 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 H1FXQ92522 213 aaKnown RBP12.67□□□□□ -0.38
CLN6-219ENST00000637329 PATZ1Q9HBE1 687 aaKnown RBP12.67□□□□□ -0.38
CLN6-219ENST00000637329 RAB18Q9NP72 206 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 KCNS2Q9ULS6 477 aa12.67□□□□□ -0.38
CLN6-219ENST00000637329 RBM7Q9Y580 266 aaKnown RBP12.67□□□□□ -0.38
CLN6-219ENST00000637329 RNF212BA8MTL3 300 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 H0Y980 276 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 GOSR2O14653 212 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 MPPED1O15442 326 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 OR2A4O95047 310 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 PAX1P15863 534 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 PDLIM4P50479 330 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 RAP2BP61225 183 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 CD300CQ08708 224 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 ZNF273Q14593 569 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 SLC9A3R2Q15599 337 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 MORN2Q502X0 79 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 TBC1D26Q86UD7 250 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 RFESDQ8TAC1 157 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 OR2A7Q96R45 310 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 PARP12Q9H0J9 701 aaKnown RBP12.66□□□□□ -0.38
CLN6-219ENST00000637329 OR2D2Q9H210 308 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 CCL28Q9NRJ3 127 aa12.66□□□□□ -0.38
CLN6-219ENST00000637329 LIN7CQ9NUP9 197 aaKnown RBP12.66□□□□□ -0.38
CLN6-219ENST00000637329 RPUSD1Q9UJJ7 312 aaKnown RBP12.66□□□□□ -0.38
CLN6-219ENST00000637329 DSCAML1Q8TD84 2053 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 C3orf85A0A1B0GTC6 90 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 A8MV72 311 aaPredicted RBP12.65□□□□□ -0.38
CLN6-219ENST00000637329 NDUFS8O00217 210 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 HSD17B6O14756 317 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 IGHV4-39P01824 125 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 C1QBP02746 253 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 OR8U9P0C7N5 309 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 TMEM187Q14656 261 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 ANKRD55Q3KP44 614 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 ZFP69Q49AA0 526 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 WDR25Q64LD2 544 aaPredicted RBP12.65□□□□□ -0.38
CLN6-219ENST00000637329 TMEM200BQ69YZ2 307 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.65□□□□□ -0.38
CLN6-219ENST00000637329 OR8U1Q8NH10 309 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 FYTTD1Q96QD9 318 aaKnown RBP12.65□□□□□ -0.38
CLN6-219ENST00000637329 TMEM222Q9H0R3 208 aa12.65□□□□□ -0.38
CLN6-219ENST00000637329 IGHV3-43A0A0B4J1X8 118 aa12.64□□□□□ -0.39
CLN6-219ENST00000637329 DUXBA0A1W2PPF3 345 aa12.64□□□□□ -0.39
CLN6-219ENST00000637329 NDUFS7O75251 213 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms