RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 CLDN12P56749 244 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 GTF2BQ00403 316 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 PRR9Q5T870 116 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 FAM151BQ6UXP7 276 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 MTERF4Q7Z6M4 381 aaKnown RBP2.41□□□□□ -2.02
CLN5-212ENST00000636602 STOML3Q8TAV4 291 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 MAL2Q969L2 176 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 TSSK6Q9BXA6 273 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.41□□□□□ -2.02
CLN5-212ENST00000636602 ICOSQ9Y6W8 199 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 FMN2Q9NZ56 1722 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.41□□□□□ -2.02
CLN5-212ENST00000636602 FAM135BQ49AJ0 1406 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 YTHDC2Q9H6S0 1430 aaKnown RBP2.41□□□□□ -2.02
CLN5-212ENST00000636602 NCOA3Q9Y6Q9 1424 aa2.41□□□□□ -2.02
CLN5-212ENST00000636602 CDC42BPGQ6DT37 1551 aa2.4□□□□□ -2.02
CLN5-212ENST00000636602 EIF3AQ14152 1382 aaKnown RBP2.4□□□□□ -2.02
CLN5-212ENST00000636602 ABCC11Q96J66 1382 aa2.4□□□□□ -2.02
CLN5-212ENST00000636602 ZNF729A6NN14 1252 aaPredicted RBP2.4□□□□□ -2.03
CLN5-212ENST00000636602 CCRL2O00421 344 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 COCHO43405 550 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 HLA-AP01891 365 aaKnown RBP2.4□□□□□ -2.03
CLN5-212ENST00000636602 RPL14P50914 215 aaKnown RBP2.4□□□□□ -2.03
CLN5-212ENST00000636602 KLF3P57682 345 aaPredicted RBP2.4□□□□□ -2.03
CLN5-212ENST00000636602 RPS11P62280 158 aaKnown RBP eCLIP2.4□□□□□ -2.03
CLN5-212ENST00000636602 BIKQ13323 160 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 CLEC12BQ2HXU8 276 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 TBC1D28Q2M2D7 210 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 CENPWQ5EE01 88 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 DRAM2Q6UX65 266 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 TCF23Q7RTU1 214 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 MNS1Q8NEH6 495 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 OR5D18Q8NGL1 313 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 SUN5Q8TC36 379 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 OTUB2Q96DC9 234 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 ARL5BQ96KC2 179 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 OR2V2Q96R30 315 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 TMEM208Q9BTX3 173 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 POTEKPQ9BYX7 375 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 TRIM45Q9H8W5 580 aaPredicted RBP2.4□□□□□ -2.03
CLN5-212ENST00000636602 PLEKHJ1Q9NW61 149 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 ZNF586Q9NXT0 402 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 ZNF492Q9P255 531 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 LRRC7Q96NW7 1537 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 RGPD8O14715 1765 aaPredicted RBP2.4□□□□□ -2.03
CLN5-212ENST00000636602 DCCP43146 1447 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 KIF1AQ12756 1690 aa2.4□□□□□ -2.03
CLN5-212ENST00000636602 NHSL1Q5SYE7 1610 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 ROCK2O75116 1388 aaKnown RBP2.39□□□□□ -2.03
CLN5-212ENST00000636602 PLXNB3Q9ULL4 1909 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 TOPAZ1Q8N9V7 1692 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 IGKV1OR2-108A0A075B7D4 117 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 A6NED7 52 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 OR5H14A6NHG9 310 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 METTL15A6NJ78 407 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 A8MWP4 228 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 HPGDSO60760 199 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 IGKV1D-33P01593 117 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 IGKV1-33P01594 117 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 PRPS1L1P21108 318 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 CD34P28906 385 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 INPP1P49441 399 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 SMAGPQ0VAQ4 97 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 IL15RAQ13261 267 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 C1DQ13901 141 aaKnown RBP2.39□□□□□ -2.03
CLN5-212ENST00000636602 HENMT1Q5T8I9 393 aaKnown RBP2.39□□□□□ -2.03
CLN5-212ENST00000636602 SPNS3Q6ZMD2 512 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 PAGE2Q7Z2X7 111 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 RIBC1Q8N443 379 aaPredicted RBP2.39□□□□□ -2.03
CLN5-212ENST00000636602 TMEM251Q8N6I4 163 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 FER1L6-AS1Q8NA97 138 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 C1orf64Q8NEQ6 169 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 OR52E4Q8NGH9 312 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 OR4A5Q8NH83 315 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 SPPL2BQ8TCT7 592 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.39□□□□□ -2.03
CLN5-212ENST00000636602 ADGRL3Q9HAR2 1447 aa2.39□□□□□ -2.03
CLN5-212ENST00000636602 AKAP12Q02952 1782 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 GPR179Q6PRD1 2367 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 ROBO1Q9Y6N7 1651 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 THADAQ6YHU6 1953 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 A0A0B4J2C4 111 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 B4DEV8 164 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 H3BQ85 93 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 M0QYV0 167 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 ZW10O43264 779 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 ARL6IP5O75915 188 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 PSMG1O95456 288 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 GPR75O95800 540 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 PDYNP01213 254 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 CGB3P0DN86 165 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 CGB7P0DN87 165 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 HIST1H1CP16403 213 aaKnown RBP2.38□□□□□ -2.03
CLN5-212ENST00000636602 GADD45AP24522 165 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 PSMA1P25786 263 aaKnown RBP2.38□□□□□ -2.03
CLN5-212ENST00000636602 CRABP2P29373 138 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 AGTR1P30556 359 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 EVI2BP34910 448 aa2.38□□□□□ -2.03
CLN5-212ENST00000636602 FLI1Q01543 452 aaPredicted RBP2.38□□□□□ -2.03
CLN5-212ENST00000636602 CASP8Q14790 479 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms