RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	COX7A2P2	O60397	106 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RAB7A	P51149	207 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FAM3A	P98173	230 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ACSF3	Q4G176	576 aa	Predicted RBP	12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997		Q56UQ5	140 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZCCHC24	Q8N2G6	241 aa	Known RBP	12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR10D4P	Q8NGN7	298 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ISOC2	Q96AB3	205 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	HSD17B10	Q99714	261 aa	Known RBP	12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RNF122	Q9H9V4	155 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RAB18	Q9NP72	206 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PTPRD	P23468	1912 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	UMAD1	C9J7I0	102 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	G6PC	P35575	357 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SLC38A11	Q08AI6	406 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ACOT6	Q3I5F7	207 aa	Predicted RBP	12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RPL7L1	Q6DKI1	246 aa	Known RBP	12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PUSL1	Q8N0Z8	303 aa	Known RBP	12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FAM168A	Q92567	244 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	R3HDM4	Q96D70	268 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SLC25A22	Q9H936	323 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FBXL17	Q9UF56	701 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SF3B6	Q9Y3B4	125 aa	Known RBP	12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SLC25A38	Q96DW6	304 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TUBG2	Q9NRH3	451 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	LOC102723996	A0A087X1L8	192 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TRBV5-5	A0A0J9YX44	114 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CTSD	P07339	412 aa	Predicted RBP	12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	GAMT	Q14353	236 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	DTX1	Q86Y01	620 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ABHD14A	Q9BUJ0	271 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	G6PC2	Q9NQR9	355 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	GAR1	Q9NY12	217 aa	Known RBP	12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CLN5	O75503	358 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR2H2	O95918	312 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CA7	P43166	264 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	C1QL2	Q7Z5L3	287 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR2W1	Q9Y3N9	320 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	WNT9B	O14905	357 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	BCL2L11	O43521	198 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FOXG1	P55316	489 aa	Predicted RBP	12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TMEM33	P57088	247 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	HLA-DRB3	P79483	266 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	KLF9	Q13886	244 aa	Predicted RBP	12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CYB5R2	Q6BCY4	276 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997		Q6ZT83	130 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FAM24B	Q8N5W8	94 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	HARBI1	Q96MB7	349 aa		12.29	□□□□□ -0.44
NEDD4L-238	ENST00000635997	NLRC5	Q86WI3	1866 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	GATC	O43716	136 aa	Known RBP	12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	NEURL1	O76050	574 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	VDAC1	P21796	283 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	F2R	P25116	425 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RAG2	P55895	527 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	C9orf106	Q8NAJ2	232 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CORO2A	Q92828	525 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SMIM7	Q9BQ49	75 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TICRR	Q7Z2Z1	1910 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997		H7BYZ3	331 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RPL36A-HNRNPH2	H7BZ11	118 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FCGR3A	P08637	254 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	DAO	P14920	347 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ORM2	P19652	201 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	COL8A1	P27658	744 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CDKN1A	P38936	164 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	THBS3	P49746	956 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ENDOG	Q14249	297 aa	Known RBP	12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PLAC9	Q5JTB6	97 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	KCNIP4	Q6PIL6	250 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TMPRSS5	Q9H3S3	457 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RHOF	Q9HBH0	211 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MT-ND4L	P03901	98 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CELA3B	P08861	270 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PSG2	P11465	335 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CEACAM3	P40198	252 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	NHLRC3	Q5JS37	347 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TEX30	Q5JUR7	227 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR4S2	Q8NH73	311 aa		12.28	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MST1	P26927	711 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MPV17	P39210	176 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TAS2R45	P59539	299 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PHYHD1	Q5SRE7	291 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNRF1	Q8ND25	227 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR5M8	Q8NGP6	311 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SYNGR2	O43760	224 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR2C1	O95371	312 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CECR9	P0C854	216 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RNF224	P0DH78	156 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	S100A7	P31151	101 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CSN1S1	P47710	185 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ARF6	P62330	175 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MMD	Q15546	238 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	LIAT1	Q6ZQX7	453 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	C15orf54	Q8N8G6	183 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR8G5	Q8NG78	346 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR1L1	Q8NH94	360 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR2T6	Q8NHC8	308 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SSMEM1	Q8WWF3	244 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNF426	Q9BUY5	554 aa		12.27	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FGF8	P55075	233 aa	Predicted RBP	12.27	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms