RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 FAM90A26D6RGX4 464 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 C15orf65H3BRN8 121 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 LGALS8O00214 317 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 NDUFA2O43678 99 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 IGLV2-14P01704 120 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 ARHGDIBP52566 201 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 VAMP2P63027 116 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 ID3Q02535 119 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 BAXQ07812 192 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 COMMD7Q86VX2 200 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 FOXRED2Q8IWF2 684 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 OR10A7Q8NGE5 316 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 OR13A1Q8NGR1 328 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 OR51H1Q8NH63 302 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 PLPPR2Q96GM1 343 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 CITED4Q96RK1 184 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 KCNJ16Q9NPI9 418 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 SHISA9B4DS77 424 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 ADAM20O43506 726 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 FSTL3O95633 263 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 LY86O95711 162 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 C1QTNF9P0C862 333 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 EDDM3AQ14507 147 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 ZNF788Q6ZQV5 615 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 UBAC2Q8NBM4 344 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 CA5BP1Q8WTZ4 195 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 CORO2AQ92828 525 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 RAB40CQ96S21 281 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 OR2D2Q9H210 308 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 DYNLRB1Q9NP97 96 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 RNF115Q9Y4L5 304 aa13.64□□□□□ -0.23
LDB3-208ENST00000623007 ASPMQ8IZT6 3477 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 TRAV39A0A0B4J263 110 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 ZNF729A6NN14 1252 aaPredicted RBP13.63□□□□□ -0.23
LDB3-208ENST00000623007 SIGLEC5O15389 551 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 TNFSF12O43508 249 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 AKR1C2P52895 323 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 MEF2CQ06413 473 aaPredicted RBP13.63□□□□□ -0.23
LDB3-208ENST00000623007 ADAM5Q6NVV9 412 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 EIF4E3Q8N5X7 224 aaKnown RBP13.63□□□□□ -0.23
LDB3-208ENST00000623007 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.63□□□□□ -0.23
LDB3-208ENST00000623007 OR52M1Q8NGK5 317 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 CYTL1Q9NRR1 136 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 GNG12Q9UBI6 72 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 METRNQ9UJH8 293 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 NCOR2Q9Y618 2525 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 KIR2DS2P43631 304 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 EDDM3BP56851 147 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 ZNF266Q14584 549 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 HSD17B13Q7Z5P4 300 aaPredicted RBP13.63□□□□□ -0.23
LDB3-208ENST00000623007 OR2C3Q8N628 320 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 KDF1Q8NAX2 398 aaPredicted RBP13.63□□□□□ -0.23
LDB3-208ENST00000623007 OR52L2PQ8NGH6 319 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 RAB39BQ96DA2 213 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 TAS2R3Q9NYW6 316 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 MMP24Q9Y5R2 645 aa13.63□□□□□ -0.23
LDB3-208ENST00000623007 ANKRD11Q6UB99 2663 aaPredicted RBP13.62□□□□□ -0.23
LDB3-208ENST00000623007 hADV38S2A0JD32 116 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 MSGN1A6NI15 193 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 C3orf80F5H4A9 247 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 PITX3O75364 302 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 MED6O75586 246 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 SCAF4O95104 1147 aaKnown RBP13.62□□□□□ -0.23
LDB3-208ENST00000623007 CD80P33681 288 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 SSTR5P35346 364 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 TMEM33P57088 247 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 RPL23AP62750 156 aaKnown RBP13.62□□□□□ -0.23
LDB3-208ENST00000623007 Q3ZCU0 254 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 ZNF808Q8N4W9 903 aaPredicted RBP13.62□□□□□ -0.23
LDB3-208ENST00000623007 SAT2Q96F10 170 aaPredicted RBP13.62□□□□□ -0.23
LDB3-208ENST00000623007 LYRM2Q9NU23 88 aaPredicted RBP13.62□□□□□ -0.23
LDB3-208ENST00000623007 CALYQ9NYX4 217 aa13.62□□□□□ -0.23
LDB3-208ENST00000623007 RCL1Q9Y2P8 373 aaKnown RBP13.62□□□□□ -0.23
LDB3-208ENST00000623007 PPIAL4EA0A075B759 164 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 IGHV3OR15-7A0A075B7D8 119 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 KBTBD11-OT1A0A1B0GTJ5 212 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.61□□□□□ -0.23
LDB3-208ENST00000623007 PPIAL4DF5H284 164 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 PPIAL4FP0DN26 164 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 TAS2R30P59541 319 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 CCL8P80075 99 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 EIF4EBP1Q13541 118 aaPredicted RBP13.61□□□□□ -0.23
LDB3-208ENST00000623007 MORN2Q502X0 79 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 C5orf24Q7Z6I8 188 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 GALNT11Q8NCW6 608 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 ZNRF1Q8ND25 227 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 GAFA1Q96PS6 74 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 GAL3ST2Q9H3Q3 398 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 CLN8Q9UBY8 286 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 PPIAL4AQ9Y536 164 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 WSB1Q9Y6I7 421 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 LOC400499M0QZD8 3231 aa13.61□□□□□ -0.23
LDB3-208ENST00000623007 FRYQ5TBA9 3013 aa13.6□□□□□ -0.23
LDB3-208ENST00000623007 E7EQL1 145 aa13.6□□□□□ -0.23
LDB3-208ENST00000623007 TMEM178BH3BS89 294 aa13.6□□□□□ -0.23
LDB3-208ENST00000623007 RBFOX2O43251 390 aaKnown RBP eCLIP13.6□□□□□ -0.23
LDB3-208ENST00000623007 CLDN1O95832 211 aa13.6□□□□□ -0.23
LDB3-208ENST00000623007 CYB5R3P00387 301 aaPredicted RBP13.6□□□□□ -0.23
LDB3-208ENST00000623007 CGB3P0DN86 165 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms