RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 LYZL2Q7Z4W2 148 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 OR1L1Q8NH94 360 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 DTD1Q8TEA8 209 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 BLNKQ8WV28 456 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 DHRS9Q9BPW9 319 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 ZNF331Q9NQX6 463 aaPredicted RBP7.94□□□□□ -1.14
GGA3-223ENST00000621870 LPAR3Q9UBY5 353 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 LSM2Q9Y333 95 aaKnown RBP7.94□□□□□ -1.14
GGA3-223ENST00000621870 FBP1P09467 338 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 PF4V1P10720 104 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 CDKN1AP38936 164 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 PDLIM4P50479 330 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 CLDN18P56856 261 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 OR8I2Q8N0Y5 310 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 OR4F17Q8NGA8 305 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 OR1L4Q8NGR5 311 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 MRPL24Q96A35 216 aaKnown RBP7.94□□□□□ -1.14
GGA3-223ENST00000621870 GPHA2Q96T91 129 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 ZMAT5Q9UDW3 170 aaKnown RBP7.94□□□□□ -1.14
GGA3-223ENST00000621870 LY86O95711 162 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 GAPDHP04406 335 aaKnown RBP7.94□□□□□ -1.14
GGA3-223ENST00000621870 CELA3BP08861 270 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 GLIPR1P48060 266 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 ZNF154Q13106 437 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 SURF2Q15527 256 aaPredicted RBP7.94□□□□□ -1.14
GGA3-223ENST00000621870 KCNMB1Q16558 191 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 PHYHD1Q5SRE7 291 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 ZNF485Q8NCK3 441 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 ZNF439Q8NDP4 499 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 ZNF680Q8NEM1 530 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 OR1L8Q8NGR8 309 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 SSMEM1Q8WWF3 244 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 GRAMD2BQ96HH9 432 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 AP1S3Q96PC3 154 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 PARP11Q9NR21 331 aa7.94□□□□□ -1.14
GGA3-223ENST00000621870 J3QR06 171 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 SLC6A1P30531 599 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 LY6EQ16553 131 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 MOGAT2Q3SYC2 334 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 PLAC9Q5JTB6 97 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 MARVELD1Q9BSK0 173 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 PIN1P1O15428 100 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 SCO1O75880 301 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 PSG2P11465 335 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 FSTP19883 344 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 HTR1DP28221 377 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 PSG7Q13046 419 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 FAM209AQ5JX71 171 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 DCAF12L2Q5VW00 463 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 ZNF788Q6ZQV5 615 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 WDR31Q8NA23 367 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 NECAP1Q8NC96 275 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 BVESQ8NE79 360 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 CALYQ9NYX4 217 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 TRBV5-5A0A0J9YX44 114 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 LRRC3CA6NJW4 275 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 UMAD1C9J7I0 102 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 CPN1P15169 458 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 CD200P41217 278 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 RAG2P55895 527 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 LAIR2Q6ISS4 152 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 HOGA1Q86XE5 327 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 RNASE6Q93091 150 aaKnown RBP7.93□□□□□ -1.14
GGA3-223ENST00000621870 TMEM45BQ96B21 275 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 PKIBQ9C010 78 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 FBXL17Q9UF56 701 aa7.93□□□□□ -1.14
GGA3-223ENST00000621870 LOC105371242A0A075B767 164 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 IGHV2OR16-5A0A0B4J2B6 119 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 HSBP1L1C9JCN9 74 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 ISG15P05161 165 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 HTN1P15515 57 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 BAGE3Q86Y29 109 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 BAGE2Q86Y30 109 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 BMPERQ8N8U9 685 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 ZNRF4Q8WWF5 429 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 PRNDQ9UKY0 176 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 MSRB2Q9Y3D2 182 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 H0Y8G0 127 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 HPXP02790 462 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 NPY1RP25929 384 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 CNN1P51911 297 aaKnown RBP7.92□□□□□ -1.14
GGA3-223ENST00000621870 FOXF2Q12947 444 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 HMGN3Q15651 99 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 SLC25A53Q5H9E4 307 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 SEZ6L2Q6UXD5 910 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 LINC00596Q86U02 117 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 ANGPTL6Q8NI99 470 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 BCL2L2Q92843 193 aaPredicted RBP7.92□□□□□ -1.14
GGA3-223ENST00000621870 TMEM54Q969K7 222 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 MEGF10Q96KG7 1140 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 NUDT16L1Q9BRJ7 211 aaKnown RBP7.92□□□□□ -1.14
GGA3-223ENST00000621870 CTDSP1Q9GZU7 261 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 G6PC2Q9NQR9 355 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 MIOXQ9UGB7 285 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 RABAC1Q9UI14 185 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 DBX1A6NMT0 343 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 E9PLN8 166 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 BCL2L11O43521 198 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 TGFAP01135 160 aa7.92□□□□□ -1.14
GGA3-223ENST00000621870 ADRB1P08588 477 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms