RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CA7P43166 264 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 LSM6P62312 80 aaKnown RBP6.3□□□□□ -1.4
COLCA1-205ENST00000620864 S100A7L2Q5SY68 101 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 CYB561D1Q8N8Q1 229 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 OR2K2Q8NGT1 345 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 OR10AC1Q8NH08 325 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 A0A1W2PS18 150 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 DPRXA6NFQ7 191 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 LINC01549A6NIU2 74 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 GABRG2P18507 467 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 FZD5Q13467 585 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 TCTN1Q2MV58 587 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 OR4X2Q8NGF9 303 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 KIR2DL4Q99706 377 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 SFXN3Q9BWM7 321 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 SH3BGRL3Q9H299 93 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 METTL12A8MUP2 240 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 PPYP01298 95 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 RBMY1A1P0DJD3 496 aaKnown RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 RBMY1CP0DJD4 496 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 VAX1Q5SQQ9 334 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 OR4C3Q8NH37 302 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 H7C2G1 150 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 UPK1AO00322 258 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 HIST1H1AQ02539 215 aaPredicted RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF750Q32MQ0 723 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM78Q5T7P6 136 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 DMKNQ6E0U4 476 aaPredicted RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 POC1AQ8NBT0 407 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 SPACA9Q96E40 222 aaPredicted RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 TTC3P53804 2025 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 TRAV38-1A0A0B4J264 116 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 CTSVO60911 334 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 SS18L1O75177 396 aaPredicted RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 AGAP20933 346 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 ATP6V0CP27449 155 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 PCBP3P57721 371 aaKnown RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 ROM1Q03395 351 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 PRSS36Q5K4E3 855 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 C16orf52Q8NHV5 167 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 SHISA4Q96DD7 197 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 PARLQ9H300 379 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 PLSCR2Q9NRY7 297 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 GPR27Q9NS67 375 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 AUP1Q9Y679 476 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 KDM3BQ7LBC6 1761 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 HYPMO75409 117 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 SP9P0CG40 484 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 MUC1P15941 1255 aaPredicted RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 CCDC144NLQ6NUI1 221 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 OR11H7Q8NGC8 314 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 MRGPRX3Q96LB0 322 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 CKS1BP61024 79 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM30BQ3MIR4 351 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 GUSBP11Q6P575 273 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 WDR13Q9H1Z4 485 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 PATE3B3GLJ2 98 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 H3BRM9 83 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
COLCA1-205ENST00000620864 B4GALT1P15291 398 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 CD69Q07108 199 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF414Q96IQ9 312 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 CYSLTR1Q9Y271 337 aa6.29□□□□□ -1.4
COLCA1-205ENST00000620864 THSD7AQ9UPZ6 1657 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 A0A0A6YYD5 115 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 NMBP08949 121 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF83P51522 516 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 MRPS11P82912 194 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 Q6AWC8 147 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 OR10J6PQ8NGY7 276 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 AQP10Q96PS8 301 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 MRPL32Q9BYC8 188 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 GEMIN7Q9H840 131 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 CNTD2Q9H8S5 307 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM30AQ9NV96 361 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 FXYD1O00168 92 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 SMRP1Q8NCR6 262 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 CCL17Q92583 94 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 FLYWCH2Q96CP2 140 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 QTRT1Q9BXR0 403 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 A0A087WWC5 75 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 PRRT4C9JH25 899 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 WNT9BO14905 357 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 GJB3O75712 270 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 PRSS2P07478 247 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 PRR35P0CG20 571 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 CSRP3P50461 194 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 FAM27D1Q5T7N8 215 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 SLC37A2Q8TED4 501 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 MRPL24Q96A35 216 aaKnown RBP6.28□□□□□ -1.4
COLCA1-205ENST00000620864 H0Y980 276 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 H7C1H1 209 aa6.28□□□□□ -1.4
COLCA1-205ENST00000620864 FGF17O60258 216 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms