RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MEF2BQ02080 365 aaPredicted RBP8.9□□□□□ -0.98
VPS11-207ENST00000620429 ARFRP1Q13795 201 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 FAM78BQ5VT40 261 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 PRR22Q8IZ63 422 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 DEFB125Q8N687 156 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 STXBP6Q8NFX7 210 aa8.9□□□□□ -0.98
VPS11-207ENST00000620429 OR2T8A6NH00 312 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 SH2D1BO14796 132 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 KITLGP21583 273 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 ASCL5Q7RTU5 278 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 FAM222BQ8WU58 562 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 ABHD14BQ96IU4 210 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 ST6GALNAC5Q9BVH7 336 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 NXF5Q9H1B4 397 aaKnown RBP8.89□□□□□ -0.99
VPS11-207ENST00000620429 TXNIPQ9H3M7 391 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 RPRMQ9NS64 109 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 HS3ST3A1Q9Y663 406 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 SPTY2D1-AS1A0A0U1RR47 76 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 G3V3Y1 287 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 GNG7O60262 68 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 GYPAP02724 150 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 IGLC1P0CG04 106 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 SRFP11831 508 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 GDF1P27539 372 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 DUSP3P51452 185 aaPredicted RBP8.89□□□□□ -0.99
VPS11-207ENST00000620429 PIGPP57054 158 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 IGLV3-21P80748 117 aaPredicted RBP8.89□□□□□ -0.99
VPS11-207ENST00000620429 HHEXQ03014 270 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 ZNF726P1Q15940 193 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 SGCBQ16585 318 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 KIAA0895LQ68EN5 471 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 ODF3L1Q8IXM7 274 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 OR1K1Q8NGR3 316 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 PLPPR1Q8TBJ4 325 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 MSI2Q96DH6 328 aaKnown RBP8.89□□□□□ -0.99
VPS11-207ENST00000620429 ATP5SQ99766 215 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 RTN4RQ9BZR6 473 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 ZDHHC11Q9H8X9 412 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 TMEM38BQ9NVV0 291 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 SEC16AO15027 2179 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 TRAPPC2LH3BP13 241 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 WISP1O95388 367 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 OMGP23515 440 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 SPIN3Q5JUX0 258 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 LCN15Q6UWW0 184 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 OR1N2Q8NGR9 330 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 KCNG3Q8TAE7 436 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 ARHGAP5-AS1Q96IT6 56 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 SPACA5Q96QH8 159 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 NRN1Q9NPD7 142 aa8.89□□□□□ -0.99
VPS11-207ENST00000620429 SAA2-SAA4A0A096LPE2 208 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 C10orf142B7Z368 130 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 GPR6P46095 362 aaPredicted RBP8.88□□□□□ -0.99
VPS11-207ENST00000620429 SLC6A8P48029 635 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 PMCHL1Q16048 86 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 SP6Q3SY56 376 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 ADAT3Q96EY9 351 aaPredicted RBP8.88□□□□□ -0.99
VPS11-207ENST00000620429 C1orf147Q96MC9 270 aaPredicted RBP8.88□□□□□ -0.99
VPS11-207ENST00000620429 LRRC61Q9BV99 259 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 LRP4O75096 1905 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 KIAA2026Q5HYC2 2103 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 DPRXA6NFQ7 191 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 ZNF737O75373 536 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 MPIG6BO95866 241 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 NRASP01111 189 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 KRASP01116 189 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 CLPSP04118 112 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 CRYBA4P53673 196 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 PSG9Q00887 426 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 FMODQ06828 376 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 BAGE3Q86Y29 109 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 BAGE2Q86Y30 109 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 OR2Y1Q8NGV0 311 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 MMABQ96EY8 250 aaPredicted RBP8.88□□□□□ -0.99
VPS11-207ENST00000620429 ABI3Q9P2A4 366 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 TBL2Q9Y4P3 447 aaKnown RBP8.88□□□□□ -0.99
VPS11-207ENST00000620429 OR51B2Q9Y5P1 312 aa8.88□□□□□ -0.99
VPS11-207ENST00000620429 SDK1Q7Z5N4 2213 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 METTL12A8MUP2 240 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 MLNRO43193 412 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 MT-CO2P00403 227 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 GP1BBP13224 206 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 NKX2-1P43699 371 aaPredicted RBP8.87□□□□□ -0.99
VPS11-207ENST00000620429 MRPS34P82930 218 aaKnown RBP8.87□□□□□ -0.99
VPS11-207ENST00000620429 HIST3H3Q16695 136 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 C5orf64Q2M2E5 130 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 ERASQ7Z444 233 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 CYYR1Q96J86 154 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 RBM24Q9BX46 236 aaKnown RBP8.87□□□□□ -0.99
VPS11-207ENST00000620429 TM2D1Q9BX74 207 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 FOXQ1Q9C009 403 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 RP1P56715 2156 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 SIRPB1O00241 398 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 MT-ATP6P00846 226 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 HLA-DOBP13765 273 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 POU3F1Q03052 451 aaPredicted RBP8.87□□□□□ -0.99
VPS11-207ENST00000620429 RNF144BQ7Z419 303 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 C5orf17Q8NAS9 161 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 OR1B1Q8NGR6 318 aa8.87□□□□□ -0.99
VPS11-207ENST00000620429 RTN4IP1Q8WWV3 396 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms