RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PRTN3P24158 256 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 PPP1CCP36873 323 aaKnown RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 ECI1P42126 302 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 LUMP51884 338 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 DVL1P1P54792 670 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 HERV-K104P61576 105 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 GNMTQ14749 295 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 RBMS2Q15434 407 aaKnown RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 SURF2Q15527 256 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 LPCAT3Q6P1A2 487 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 BTNL3Q6UXE8 466 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 CCBE1Q6UXH8 406 aaPredicted RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 LINC01356Q8N9X3 169 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 MINDY2Q8NBR6 621 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 WFDC11Q8NEX6 87 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 OR8U1Q8NH10 309 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 ZFAND1Q8TCF1 268 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 FAM216AQ8WUB2 273 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 EDARADDQ8WWZ3 215 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 MARVELD1Q9BSK0 173 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 TMEM133Q9H2Q1 129 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 METTL8Q9H825 291 aaKnown RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 UNKLQ9H9P5 680 aaKnown RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 LPAR2Q9HBW0 351 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 ONECUT1Q9UBC0 465 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 GAB2Q9UQC2 676 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 NUBP2Q9Y5Y2 271 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 MED13LQ71F56 2210 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 PRRC2AP48634 2157 aaKnown RBP6.57□□□□□ -1.36
CPNE3-209ENST00000620393 TRAV20A0A0B4J274 112 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 IGKV1D-13A0A0B4J2D9 117 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 H2AFB2P0C5Z0 115 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 IGKV1-13P0DP09 117 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 PGAM2P15259 253 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 CD34P28906 385 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 GNRHRP30968 328 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 GZMKP49863 264 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF134P52741 427 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 RAG2P55895 527 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 FXYD4P59646 89 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 TMEM249Q2WGJ8 235 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 TRIM16LQ309B1 348 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 CT45A1Q5HYN5 189 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 UTF1Q5T230 341 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 PLET1Q6UQ28 207 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 GLCCI1Q86VQ1 547 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 LDLRAD3Q86YD5 345 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 ABHD12Q8N2K0 398 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 CENPSQ8N2Z9 138 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 LINC00311Q8N616 119 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 ZDHHC22Q8N966 263 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 C8orf31Q8N9H6 132 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 MAPK1IP1LQ8NDC0 245 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF439Q8NDP4 499 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 CT45A3Q8NHU0 189 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF596Q8TC21 504 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 MARCH1Q8TCQ1 289 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 TNFRSF14Q92956 283 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 AGMATQ9BSE5 352 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 RTBDNQ9BSG5 229 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-209ENST00000620393 SUCNR1Q9BXA5 334 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 SLC5A7Q9GZV3 580 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 PARP12Q9H0J9 701 aaKnown RBP6.56□□□□□ -1.36
CPNE3-209ENST00000620393 SIRPDQ9H106 197 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 MMP28Q9H239 520 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 GHITMQ9H3K2 345 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 HEXA-AS1Q9H8Q6 139 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 RNF150Q9ULK6 438 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 FLVCR2Q9UPI3 526 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 PSG11Q9UQ72 335 aa6.56□□□□□ -1.36
CPNE3-209ENST00000620393 RBM7Q9Y580 266 aaKnown RBP6.56□□□□□ -1.36
CPNE3-209ENST00000620393 TRAV6A0A075B6T7 132 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 INMT-MINDY4F8WBC2 141 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 J3QR06 171 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 SLC22A5O76082 557 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 TOX4O94842 621 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 IGHV3-7P01780 117 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 CTSDP07339 412 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-209ENST00000620393 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 MMP9P14780 707 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 GATA3P23771 443 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 RAB7AP51149 207 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 PRRX1P54821 245 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 MSMO1Q15800 293 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 METTL11BQ5VVY1 283 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 CYB5R2Q6BCY4 276 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 SLC25A48Q6ZT89 311 aaKnown RBP6.55□□□□□ -1.36
CPNE3-209ENST00000620393 SLC38A6Q8IZM9 456 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 ZBTB34Q8NCN2 500 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 OR2AK2Q8NG84 335 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 OR11H6Q8NGC7 330 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 OR13D1Q8NGV5 346 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 OR9G1Q8NH87 305 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 SECTM1Q8WVN6 248 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 LEAP2Q969E1 77 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 TOMM40LQ969M1 308 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 TMEM186Q96B77 213 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 CREB3L1Q96BA8 519 aa6.55□□□□□ -1.36
CPNE3-209ENST00000620393 MSI2Q96DH6 328 aaKnown RBP6.55□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF486Q96H40 463 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms