RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 MRPS16Q9Y3D3 137 aaKnown RBP3.89□□□□□ -1.79
CHL1-216ENST00000620033 YTHDF2Q9Y5A9 579 aaKnown RBP3.89□□□□□ -1.79
CHL1-216ENST00000620033 SOX21Q9Y651 276 aaPredicted RBP3.89□□□□□ -1.79
CHL1-216ENST00000620033 SMAD5-AS1Q9Y6J3 95 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 MIA3Q5JRA6 1907 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 ZNF729A6NN14 1252 aaPredicted RBP3.89□□□□□ -1.79
CHL1-216ENST00000620033 PAPLNO95428 1278 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 GPR183P32249 361 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 CDX1P47902 265 aaPredicted RBP3.89□□□□□ -1.79
CHL1-216ENST00000620033 PRNTQ86SH4 94 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 OR52I1Q8NGK6 324 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 FAM213BQ8TBF2 198 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 GPX8Q8TED1 209 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 EDA2RQ9HAV5 297 aa3.89□□□□□ -1.79
CHL1-216ENST00000620033 KIAA1217Q5T5P2 1943 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 KRBOX1C9JBD0 128 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 FAM189A1O60320 539 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ZNF324O75467 553 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 CX3CL1P78423 397 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 PSG6Q00889 435 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 CD83Q01151 205 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 GLDNQ6ZMI3 551 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 KLHDC1Q8N7A1 406 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ABHD14BQ96IU4 210 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 C2orf50Q96LR7 162 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 TAF9BQ9HBM6 251 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 MBNL3Q9NUK0 354 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 V9GYS6 101 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 KIAA0100Q14667 2235 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 GGCTO75223 188 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 IGLV3-19P01714 112 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 RD3LP0DJH9 198 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 FOSL1P15407 271 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ALOX5APP20292 161 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 COX5AP20674 150 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 MPV17P39210 176 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 PDZK1IP1Q13113 114 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 IDO2Q6ZQW0 420 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 C8orf86Q6ZUL3 223 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 TMEM116Q8NCL8 245 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ZNF385AQ96PM9 386 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 RSG1Q9BU20 258 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 RNPEPL1Q9HAU8 725 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 PGPEP1Q9NXJ5 209 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ING1Q9UK53 422 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 TDRD6O60522 2096 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 DOCK5Q9H7D0 1870 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 NUMA1Q14980 2115 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 TMEM129A0AVI4 362 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 CD5P06127 495 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 EVI2AP22794 236 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 NR4A2P43354 598 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 SUCLG1P53597 346 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 RELAQ04206 551 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 DUX4L9Q6RFH8 374 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 Q6ZS92 163 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 PIP4P1Q86T03 277 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 RBM45Q8IUH3 476 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 OR13C6PQ8NH95 151 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 FIZ1Q96SL8 496 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 C2orf88Q9BSF0 95 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 C11orf68Q9H3H3 251 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 SDF2L1Q9HCN8 221 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 IL36RNQ9UBH0 155 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ZNF705FA8MVS1 300 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 IGLL5B9A064 214 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 NEURL1O76050 574 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 FSHBP01225 129 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ASAH2BP0C7U1 165 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ZNF705DP0CH99 300 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 ZNF705BP0CI00 300 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 RANP62826 216 aaKnown RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 KISS1Q15726 138 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 KHDC3LQ587J8 217 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 MEIG1Q5JSS6 88 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 TOR2AQ5JU69 321 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 NCMAPQ5T1S8 102 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 PACRGLQ8N7B6 248 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 HMGCLL1Q8TB92 370 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 CITED4Q96RK1 184 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 SYT11Q9BT88 431 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 EBF2Q9HAK2 575 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ARL2-SNX15V9GYD0 113 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 A0A0G2JMM0 328 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 A0A1W2PPB8 328 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 A0A1W2PQL4 384 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 A0A1W2PRS3 328 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 KIR3DP1A8MWS1 328 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 SLC25A4P12235 298 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ZNF841Q6ZN19 808 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 ATG4DQ86TL0 474 aaPredicted RBP3.88□□□□□ -1.79
CHL1-216ENST00000620033 GHSRQ92847 366 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 TMEM54Q969K7 222 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 PTX4Q96A99 478 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 SIGLEC11Q96RL6 698 aa3.88□□□□□ -1.79
CHL1-216ENST00000620033 MFSD2BA6NFX1 497 aa3.87□□□□□ -1.79
CHL1-216ENST00000620033 KLRD1Q13241 179 aa3.87□□□□□ -1.79
CHL1-216ENST00000620033 TPRX1Q8N7U7 411 aa3.87□□□□□ -1.79
CHL1-216ENST00000620033 SLC35B4Q969S0 331 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms