RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 A0A0B4J203 849 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 PSMB11A5LHX3 300 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 MCRIP1C9JLW8 97 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 VSIG8P0DPA2 414 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 EGFEM1PQ0D2K5 195 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 P2RY14Q15391 338 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 C2orf76Q3KRA6 126 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 TMEM30BQ3MIR4 351 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 VAX1Q5SQQ9 334 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 IDNKQ5T6J7 187 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 RAB12Q6IQ22 244 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 LINC00311Q8N616 119 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 OR51D1Q8NGF3 324 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 RFESDQ8TAC1 157 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 AP3S1Q92572 193 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 TOMM40LQ969M1 308 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 RPEQ96AT9 228 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 CST11Q9H112 138 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 SPATA2Q9UM82 520 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 ETV7Q9Y603 341 aa15.01□□□□□ -0.01
CDX1-202ENST00000616154 TRAV39A0A0B4J263 110 aa15□□□□□ -0.01
CDX1-202ENST00000616154 A0A1W2PPI3 338 aa15□□□□□ -0.01
CDX1-202ENST00000616154 WI2-2373I1.2A0A1W2PRP0 233 aa15□□□□□ -0.01
CDX1-202ENST00000616154 SNRNP70P08621 437 aaKnown RBP15□□□□□ -0.01
CDX1-202ENST00000616154 ARSBP15848 533 aa15□□□□□ -0.01
CDX1-202ENST00000616154 FUT3P21217 361 aa15□□□□□ -0.01
CDX1-202ENST00000616154 UNC119Q13432 240 aa15□□□□□ -0.01
CDX1-202ENST00000616154 MADCAM1Q13477 382 aa15□□□□□ -0.01
CDX1-202ENST00000616154 ETV3LQ6ZN32 361 aa15□□□□□ -0.01
CDX1-202ENST00000616154 ZNF554Q86TJ5 538 aa15□□□□□ -0.01
CDX1-202ENST00000616154 GPR61Q9BZJ8 451 aa15□□□□□ -0.01
CDX1-202ENST00000616154 SELENOIQ9C0D9 397 aa15□□□□□ -0.01
CDX1-202ENST00000616154 BANF2Q9H503 90 aa15□□□□□ -0.01
CDX1-202ENST00000616154 MBNL3Q9NUK0 354 aaKnown RBP15□□□□□ -0.01
CDX1-202ENST00000616154 TMEM272A0A1B0GTI8 110 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 PDCD6O75340 191 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 CRTAPO75718 401 aaPredicted RBP14.99□□□□□ -0.01
CDX1-202ENST00000616154 SNRPBP14678 240 aaKnown RBP14.99□□□□□ -0.01
CDX1-202ENST00000616154 RAB6AP20340 208 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 OR8H3Q8N146 312 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 OR5H6Q8NGV6 325 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 OR56B4Q8NH76 319 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 KCNG3Q8TAE7 436 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 LGALS14Q8TCE9 139 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 ARL11Q969Q4 196 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 CMTM3Q96MX0 182 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 GFOD1Q9NXC2 390 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 ETAA1Q9NY74 926 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 PTTG2Q9NZH5 202 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 PEX16Q9Y5Y5 336 aa14.99□□□□□ -0.01
CDX1-202ENST00000616154 C12orf77C9JDV5 145 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 RAB7AP51149 207 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 RPL23AP62750 156 aaKnown RBP14.98□□□□□ -0.01
CDX1-202ENST00000616154 ZNF816Q0VGE8 651 aaPredicted RBP14.98□□□□□ -0.01
CDX1-202ENST00000616154 TRAT1Q6PIZ9 186 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 MRPL41Q8IXM3 137 aaKnown RBP14.98□□□□□ -0.01
CDX1-202ENST00000616154 DRAM1Q8N682 238 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 C5orf56Q8N8D9 126 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 NEK7Q8TDX7 302 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 CHPT1Q8WUD6 406 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 LEAP2Q969E1 77 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 SLC25A38Q96DW6 304 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 TM2D1Q9BX74 207 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 KCNK15Q9H427 330 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 RAB9BQ9NP90 201 aa14.98□□□□□ -0.01
CDX1-202ENST00000616154 TENM3Q9P273 2699 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 FGF16O43320 207 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 TMEM11P17152 192 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 CHATP28329 748 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 HOXD3P31249 432 aaPredicted RBP14.97□□□□□ -0.01
CDX1-202ENST00000616154 THBS3P49746 956 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 ZNF137PP52743 207 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 RPS27AP62979 156 aaKnown RBP14.97□□□□□ -0.01
CDX1-202ENST00000616154 PLA2G7Q13093 441 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 DEFB121Q5J5C9 76 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 C6orf183Q5T699 404 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 OR10K2Q6IF99 312 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 ZNF329Q86UD4 541 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 FAM89BQ8N5H3 189 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 ZNF439Q8NDP4 499 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 DPF1Q92782 380 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 RAB22AQ9UL26 194 aa14.97□□□□□ -0.01
CDX1-202ENST00000616154 IGHV3-7P01780 117 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 SLC6A1P30531 599 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 DIAPH2-AS1Q14236 149 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 HES1Q14469 280 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 LTC4SQ16873 150 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 C11orf87Q6NUJ2 197 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 MZT2AQ6P582 158 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 MCFD2Q8NI22 146 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 CCDC107Q8WV48 283 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 ST6GALNAC6Q969X2 333 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 FAM46BQ96A09 425 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 TMEM59Q9BXS4 323 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 LPAR5Q9H1C0 372 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 ABCG5Q9H222 651 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 MIXL1Q9H2W2 232 aa14.96□□□□□ -0.01
CDX1-202ENST00000616154 FOXI3A8MTJ6 420 aaPredicted RBP14.95□□□□□ -0.02
CDX1-202ENST00000616154 SDCBPO00560 298 aaPredicted RBP14.95□□□□□ -0.02
CDX1-202ENST00000616154 SPINT2O43291 252 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms