RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	ITGB1BP1	O14713	200 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	CD36	P16671	472 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	TMEM11	P17152	192 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	GADD45A	P24522	165 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	VDAC2	P45880	294 aa	Predicted RBP	13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	NEDD8	Q15843	81 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	TGIF2LX	Q8IUE1	241 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	C5orf56	Q8N8D9	126 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	OR10R2	Q8NGX6	335 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	RAB3C	Q96E17	227 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	KCTD7	Q96MP8	289 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	CMSS1	Q9BQ75	279 aa	Known RBP	13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	ABHD14A	Q9BUJ0	271 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455	C12orf4	Q9NQ89	552 aa		13.28	□□□□□ -0.28
CCND3-222	ENST00000612455		A0A087WXM4	84 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	TRIM64C	A6NLI5	447 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	TNFAIP8	O95379	198 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	LPL	P06858	475 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	SDC2	P34741	201 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	HES1	Q14469	280 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	HNF4G	Q14541	408 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	TMEM95	Q3KNT9	176 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	LYG1	Q8N1E2	194 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	OR2T10	Q8NGZ9	312 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	CHCHD6	Q9BRQ6	235 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	MMP27	Q9H306	513 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	RNF167	Q9H6Y7	350 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	PLSCR3	Q9NRY6	295 aa		13.27	□□□□□ -0.29
CCND3-222	ENST00000612455	IGHV3-72	A0A0B4J1Y9	119 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	SMIM30	A4D0T7	59 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	METTL21EP	A6NDL7	271 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	SH2D7	A6NKC9	451 aa	Predicted RBP	13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	ZNF736	B4DX44	427 aa	Predicted RBP	13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	MFNG	O00587	321 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	SCT	P09683	121 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	CD28	P10747	220 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	HLA-DRB3	P79483	266 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	TSPAN14	Q8NG11	270 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	SETD6	Q8TBK2	473 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	IL1F10	Q8WWZ1	152 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	AGMAT	Q9BSE5	352 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	TOLLIP	Q9H0E2	274 aa		13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
CCND3-222	ENST00000612455	IGKV1-6	A0A0C4DH72	117 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	TRDC	B7Z8K6	153 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	FBXO24	O75426	580 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	MOS	P00540	346 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	CLEC2L	P0C7M8	214 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	HIST1H1D	P16402	221 aa	Known RBP	13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	C2orf68	Q2NKX9	166 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	HIST2H2BD	Q6DRA6	164 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	SFXN4	Q6P4A7	337 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	ZNF833P	Q6ZTB9	187 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	C11orf44	Q8N8P7	122 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	OR2AK2	Q8NG84	335 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	NABP2	Q9BQ15	211 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	ZNF251	Q9BRH9	671 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	CENPO	Q9BU64	300 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	IFI27L2	Q9H2X8	130 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	GHITM	Q9H3K2	345 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	SLC23A1	Q9UHI7	598 aa		13.25	□□□□□ -0.29
CCND3-222	ENST00000612455	ADARB2-AS1	A8MUL3	147 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	SERPINE3	A8MV23	424 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	TSPAN15	O95858	294 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	IGHG2	P01859	326 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	CSF1	P09603	554 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	CD3G	P09693	182 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	GNB3	P16520	340 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	ZBTB25	P24278	435 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	CEACAM6	P40199	344 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	CD83	Q01151	205 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	LSAMP	Q13449	338 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	FAM71F2	Q6NXP2	309 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.24	□□□□□ -0.29
CCND3-222	ENST00000612455		Q8N9W7	124 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	OR5AU1	Q8NGC0	362 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	OR8H1	Q8NGG4	311 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	YIPF6	Q96EC8	236 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	PARP12	Q9H0J9	701 aa	Known RBP	13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	ATG5	Q9H1Y0	275 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	PIPOX	Q9P0Z9	390 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	DAPK2	Q9UIK4	370 aa		13.24	□□□□□ -0.29
CCND3-222	ENST00000612455	LOC100506127	A0A0U1RQW1	187 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	PEX14	O75381	377 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	FCGR3A	P08637	254 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	OR3A3	P47888	321 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	SCAND1	P57086	179 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	ARL6IP1	Q15041	203 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	TCTEX1D4	Q5JR98	221 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455		Q6ZS49	121 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	OR4A4P	Q8NGN8	299 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	CITED2	Q99967	270 aa	Predicted RBP	13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	LIN7C	Q9NUP9	197 aa	Known RBP	13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	OR1A1	Q9P1Q5	309 aa		13.23	□□□□□ -0.29
CCND3-222	ENST00000612455	SAA2-SAA4	A0A096LPE2	208 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	RAB29	O14966	203 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	ST8SIA5	O15466	376 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms