RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 GGACTQ9BVM4 153 aa2.45□□□□□ -2.02
SMCHD1-213ENST00000609587 FBXL15Q9H469 300 aa2.45□□□□□ -2.02
SMCHD1-213ENST00000609587 POMKQ9H5K3 350 aa2.45□□□□□ -2.02
SMCHD1-213ENST00000609587 ZNF442Q9H7R0 627 aa2.45□□□□□ -2.02
SMCHD1-213ENST00000609587 TMEM138Q9NPI0 162 aa2.45□□□□□ -2.02
SMCHD1-213ENST00000609587 PTPRJQ12913 1337 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 BRCA1P38398 1863 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 ZCCHC11Q5TAX3 1644 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 TRAV40A0A0B4J280 105 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 IGKV1-8A0A0C4DH67 115 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 A0A0J9YXV3 536 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 PVALEFA0A1B0GWK0 134 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 OR4C46A6NHA9 309 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 MFSD11O43934 449 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 MT-CO2P00403 227 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 OR5G3P0C626 314 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 ZNF688P0C7X2 276 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 SMIM6P0DI80 62 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 SDC4P31431 198 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 TALDO1P37837 337 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 MYCNOSP40205 109 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 CXCL12P48061 93 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 RHOBP62745 196 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 RPL23P62829 140 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 CRADDP78560 199 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 CDK5Q00535 292 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 RSU1Q15404 277 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 LY6EQ16553 131 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 ARHGAP11BQ3KRB8 267 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 TMEM128Q5BJH2 165 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 C1orf195Q5TG92 126 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 TEX36Q5VZQ5 186 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 OPN5Q6U736 354 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 SPNS3Q6ZMD2 512 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 FAM183BPQ6ZVS7 135 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 SLC16A13Q7RTY0 426 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 NEGR1Q7Z3B1 354 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 RAB43Q86YS6 212 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 EIF4E3Q8N5X7 224 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 RNF182Q8N6D2 247 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 UBAC2Q8NBM4 344 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 OR13G1Q8NGZ3 307 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 LINC01560Q8TB33 94 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 TNFAIP8L1Q8WVP5 186 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 C1orf54Q8WWF1 131 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 DNAJC30Q96LL9 226 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 PFDN5Q99471 154 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 RTBDNQ9BSG5 229 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 KIFC1Q9BW19 673 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 FGF23Q9GZV9 251 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 SPANXA1Q9NS26 97 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 COMMD9Q9P000 198 aa2.44□□□□□ -2.02
SMCHD1-213ENST00000609587 CLUHO75153 1309 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 DENND4AQ7Z401 1863 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 A0A087WX48 190 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 A0A1W2PRE2 83 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 ISPDA4D126 451 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 H0YJW9 148 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 FAAHO00519 579 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 TXNDC9O14530 226 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 SLC22A1O15245 554 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 CHST10O43529 356 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 CCNE2O96020 404 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 SERPINA7P05543 415 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 PFN1P07737 140 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 FAM228BP0C875 321 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 COX4I1P13073 169 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 ZNF708P17019 499 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 PAX6P26367 422 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 PPICP45877 212 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 GCLMP48507 274 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 TCTAP57738 103 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 HSPE1P61604 102 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 SLC35A1P78382 337 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 EMX1Q04741 257 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 GRK1Q15835 563 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 ACSBG2Q5FVE4 666 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 C9orf64Q5T6V5 341 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 LAMTOR1Q6IAA8 161 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 OR10K2Q6IF99 312 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 COMMD7Q86VX2 200 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 C10orf107Q8IVU9 208 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 ZBTB8OSQ8IWT0 167 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 ST6GALNAC3Q8NDV1 305 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 GPR26Q8NDV2 337 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 CIRBP-AS1Q8TBR5 109 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 NT5CQ8TCD5 201 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 DEDD2Q8WXF8 326 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 APOBEC3DQ96AK3 386 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 SMARCD1Q96GM5 515 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 BTF3L4Q96K17 158 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 PGLYRP3Q96LB9 341 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 RNF5Q99942 180 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 SLIRPQ9GZT3 109 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 MED29Q9NX70 200 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 ANXA10Q9UJ72 324 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 BTRCQ9Y297 605 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 POLR1DQ9Y2S0 133 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 UBIAD1Q9Y5Z9 338 aa2.43□□□□□ -2.02
SMCHD1-213ENST00000609587 SOGA1O94964 1423 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms