RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 NDUFB8O95169 186 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 OR6A2O95222 327 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 CLDN1O95832 211 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 IGHEP01854 428 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 HLA-HP01893 362 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 STATHP02808 62 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 CELA2AP08217 269 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SMIM17P0DL12 118 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 GP1BBP13224 206 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 CTRLP40313 264 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 GALR1P47211 349 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 YPEL3P61236 119 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 RPS4XP62701 263 aaKnown RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 CSNK1G2P78368 415 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 BTN3A2P78410 334 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 RBPJQ06330 500 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 Q0VFX4 171 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 Q0VG73 95 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 FOXL1Q12952 345 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SCGB2A2Q13296 93 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 FHL1Q13642 323 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SLC9A3R2Q15599 337 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.37□□□□□ -1.71
SSX9-202ENST00000608568 RNF151Q2KHN1 245 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PLPPR5Q32ZL2 321 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 GLYATL3Q5SZD4 288 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 MFSD12Q6NUT3 480 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SLC48A1Q6P1K1 146 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 TMEM182Q6ZP80 229 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 C22orf34Q6ZV56 151 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 CXorf67Q86X51 503 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 MEX3DQ86XN8 651 aaKnown RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 ZNF440Q8IYI8 595 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 C1orf174Q8IYL3 243 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 FBXL14Q8N1E6 418 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SLC22A24Q8N4F4 322 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 RAB42Q8N4Z0 105 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 RFLNBQ8N5W9 214 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 TMEM156Q8N614 296 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 OR5AU1Q8NGC0 362 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 OR1L6Q8NGR2 347 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 OR6N2Q8NGY6 317 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 OR4K13Q8NH42 304 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PFN4Q8NHR9 129 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 TOMM40LQ969M1 308 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SPSB1Q96BD6 273 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PINX1Q96BK5 328 aaKnown RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 WDYHV1Q96HA8 205 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 THOC3Q96J01 351 aaKnown RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 C16orf92Q96LL3 132 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 ZNF48Q96MX3 618 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 TNFRSF13CQ96RJ3 184 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 NKX3-1Q99801 234 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 RARRES2Q99969 163 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PSMG3Q9BT73 122 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 ELOVL1Q9BW60 279 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 BANF2Q9H503 90 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PLEKHF2Q9H8W4 249 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 C20orf141Q9NUB4 165 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 ZNF586Q9NXT0 402 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 ELOVL5Q9NYP7 299 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PLEK2Q9NYT0 353 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PRSS50Q9UI38 385 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 ERRFI1Q9UJM3 462 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 FBXL7Q9UJT9 491 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 HHLA2Q9UM44 414 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 LAMP3Q9UQV4 416 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 SLC5A6Q9Y289 635 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 IER3IP1Q9Y5U9 82 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 PXMP4Q9Y6I8 212 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 ZNF780BQ9Y6R6 833 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 ABCA2Q9BZC7 2435 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 FREM1Q5H8C1 2179 aa4.37□□□□□ -1.71
SSX9-202ENST00000608568 NSD1Q96L73 2696 aaPredicted RBP4.37□□□□□ -1.71
SSX9-202ENST00000608568 TRAV27A0A087WT01 109 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 A0A087WV62 115 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 IGHV2-26A0A0B4J1V2 119 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 IGKV1-8A0A0C4DH67 115 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 A0A0G2JN53 185 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 SERPINE3A8MV23 424 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 TMEM14DPA8MWL7 114 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 ZNF814B7Z6K7 855 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 F8W735 103 aaPredicted RBP4.36□□□□□ -1.71
SSX9-202ENST00000608568 H0Y8G0 127 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 TRAPPC2LH3BP13 241 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 SAP18O00422 153 aaKnown RBP4.36□□□□□ -1.71
SSX9-202ENST00000608568 HMGB3O15347 200 aaKnown RBP4.36□□□□□ -1.71
SSX9-202ENST00000608568 TRAF3IP2O43734 574 aaPredicted RBP4.36□□□□□ -1.71
SSX9-202ENST00000608568 TMPRSS11DO60235 418 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 LDB3O75112 727 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 WISP2O76076 250 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 KBTBD11O94819 623 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 RENP00797 406 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 CSTAP01040 98 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 GYPBP06028 91 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 DBHP09172 617 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 STAG3L3P0CL85 134 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 IGLC2P0DOY2 106 aa4.36□□□□□ -1.71
SSX9-202ENST00000608568 IGLC3P0DOY3 106 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms