RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 OR14A2Q96R54 314 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 CST11Q9H112 138 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 CHMP1AQ9HD42 196 aaPredicted RBP11.55□□□□□ -0.56
CTSA-216ENST00000607212 ABRACLQ9P1F3 81 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 NKX1-2Q9UD57 310 aaPredicted RBP11.55□□□□□ -0.56
CTSA-216ENST00000607212 CLEC2DQ9UHP7 191 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 ZNF580Q9UK33 172 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 JPT1Q9UK76 154 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 IGHV7-81A0A0B4J1V7 117 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 TRBV5-5A0A0J9YX44 114 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 LINC01619G3V211 115 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 I3L521 148 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 CA11O75493 328 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 GP9P14770 177 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 SPNP16150 400 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 PPIFP30405 207 aaKnown RBP11.54□□□□□ -0.56
CTSA-216ENST00000607212 CAPGP40121 348 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 OR3A3P47888 321 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 PITPNAQ00169 270 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 C5orf64Q2M2E5 130 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 ASPHD1Q5U4P2 390 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 STEAP3Q658P3 488 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 C5orf24Q7Z6I8 188 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 CASTOR1Q8WTX7 329 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 IL1F10Q8WWZ1 152 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 GALMQ96C23 342 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 TMEM80Q96HE8 168 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 RITA1Q96K30 269 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 NEDD4LQ96PU5 975 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 NABP2Q9BQ15 211 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 STEAP1Q9UHE8 339 aa11.54□□□□□ -0.56
CTSA-216ENST00000607212 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 FAM90A10PA6NDY2 464 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 FAM90A7PA6NKC0 464 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 FAM90A23PA8MXZ1 464 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 H7C2Y5 167 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 LALBAP00709 142 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 IGHV3-11P01762 117 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 GSTP1P09211 210 aaKnown RBP11.53□□□□□ -0.56
CTSA-216ENST00000607212 SAA2P0DJI9 122 aaPredicted RBP11.53□□□□□ -0.56
CTSA-216ENST00000607212 LYL1P12980 280 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 FSTP19883 344 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 RUNX1Q01196 453 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 CASC10Q5T4H9 136 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 MYOZ3Q8TDC0 251 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 CYGBQ8WWM9 190 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 ARPC1AQ92747 370 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 DLX4Q92988 240 aaPredicted RBP11.53□□□□□ -0.56
CTSA-216ENST00000607212 OR4C12Q96R67 309 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 RSRP1Q9BUV0 290 aa11.53□□□□□ -0.56
CTSA-216ENST00000607212 SMPD3Q9NY59 655 aaPredicted RBP11.53□□□□□ -0.56
CTSA-216ENST00000607212 DIMT1Q9UNQ2 313 aaKnown RBP11.53□□□□□ -0.56
CTSA-216ENST00000607212 FOXA2Q9Y261 457 aaPredicted RBP11.53□□□□□ -0.56
CTSA-216ENST00000607212 PDCD6O75340 191 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 WBP4O75554 376 aaKnown RBP11.52□□□□□ -0.57
CTSA-216ENST00000607212 IGLV1-40P01703 118 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 FRMD6-AS1P0C7T7 363 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 CD40LGP29965 261 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 DMKNQ6E0U4 476 aaPredicted RBP11.52□□□□□ -0.57
CTSA-216ENST00000607212 FAM131AQ6UXB0 335 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 PQLC1Q8N2U9 271 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 MRPL30Q8TCC3 161 aaKnown RBP11.52□□□□□ -0.57
CTSA-216ENST00000607212 Q96M66 194 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 CLCC1Q96S66 551 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 FBXL15Q9H469 300 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 S100A14Q9HCY8 104 aa11.52□□□□□ -0.57
CTSA-216ENST00000607212 IGHV4OR15-8A0A075B7B6 117 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 A0A087WW49 117 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 MYL12BO14950 172 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 ST8SIA5O15466 376 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 YPEL1O60688 119 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 GPX5O75715 221 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 GLAP06280 429 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
CTSA-216ENST00000607212 OR8U9P0C7N5 309 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 TPPP2P59282 170 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 TAS2R43P59537 309 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 HTD2P86397 168 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 TMEM267Q0VDI3 215 aaPredicted RBP11.51□□□□□ -0.57
CTSA-216ENST00000607212 KIAA0141Q14154 515 aaPredicted RBP11.51□□□□□ -0.57
CTSA-216ENST00000607212 LRRC36Q1X8D7 754 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 ZFAND6Q6FIF0 208 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 UNQ5815/PRO19632Q6UWF5 114 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 GLDNQ6ZMI3 551 aaPredicted RBP11.51□□□□□ -0.57
CTSA-216ENST00000607212 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 ODF3L1Q8IXM7 274 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 NKAIN3Q8N8D7 197 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 RDH12Q96NR8 316 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 MS4A10Q96PG2 267 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 YPEL2Q96QA6 119 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 ZNF355PQ9NSJ1 428 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 MBNL3Q9NUK0 354 aaKnown RBP11.51□□□□□ -0.57
CTSA-216ENST00000607212 RNF150Q9ULK6 438 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 LRRC42Q9Y546 428 aa11.51□□□□□ -0.57
CTSA-216ENST00000607212 TRBV5-7A0A0A0MS05 114 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 TRIM64CA6NLI5 447 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 SC5DO75845 299 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 MAPK3P27361 379 aaPredicted RBP11.5□□□□□ -0.57
CTSA-216ENST00000607212 RPS11P62280 158 aaKnown RBP eCLIP11.5□□□□□ -0.57
CTSA-216ENST00000607212 DOC2BQ14184 412 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms