RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 C17orf78Q8N4C9 275 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 ERMNQ8TAM6 284 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 EBNA1BP2Q99848 306 aaKnown RBP1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 ACBD6Q9BR61 282 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 UGT2B28Q9BY64 529 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 OR52A5Q9H2C5 316 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 SMDT1Q9H4I9 107 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 C11orf1Q9H5F2 150 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 ASCL3Q9NQ33 180 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 MS4A12Q9NXJ0 267 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 COMMD9Q9P000 198 aa1.34□□□□□ -2.19
RNU6-88P-201ENST00000606801 MUC21A0A0G2JKD1 596 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 MUC21A0A140T8X8 626 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 IQCF5A8MTL0 148 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 LY6LH3BQJ8 138 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 SMLR1H3BR10 107 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 TRAPPC3O43617 180 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 PRB1P04280 392 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 FBP1P09467 338 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 OR4A8P0C604 315 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 ORM2P19652 201 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 STC1P52823 247 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 FGF12P61328 243 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 GTF2BQ00403 316 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 ZNF117Q03924 483 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 BOD1L2Q8IYS8 172 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 DNAJC30Q96LL9 226 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 TBX5Q99593 518 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 GNB1LQ9BYB4 327 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 FAM206AQ9NX38 181 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 TMEM216Q9P0N5 145 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 CCDC88CQ9P219 2028 aa1.33□□□□□ -2.2
RNU6-88P-201ENST00000606801 HELZ2Q9BYK8 2649 aaKnown RBP1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 A0A1W2PQL4 384 aaPredicted RBP1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 C9J4A7 227 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 M0QYV0 167 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 LY6HO94772 140 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 RD3LP0DJH9 198 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 CD99P14209 185 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 ZNF140P52738 457 aaPredicted RBP1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 DLX6P56179 175 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 RAB8AP61006 207 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 PDK2Q15119 407 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 LGALS9CQ6DKI2 356 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 TTC33Q6PID6 262 aaPredicted RBP1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 OR11H1Q8NG94 326 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 OR5K1Q8NHB7 308 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 MED18Q9BUE0 208 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 ZNF426Q9BUY5 554 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 NRBP2Q9NSY0 501 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 MALRD1Q5VYJ5 2156 aa1.32□□□□□ -2.2
RNU6-88P-201ENST00000606801 ZFHX2Q9C0A1 2572 aaPredicted RBP1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 DICER1Q9UPY3 1922 aaKnown RBP1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 FAM25EA8MYX2 175 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 F5H5K5 113 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 NQO1P15559 274 aaKnown RBP1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 CDK2P24941 298 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 ADORA1P30542 326 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 KDELR2P33947 212 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 RWDD2BP57060 319 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 ACTBP60709 375 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 ACTG1P63261 375 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 USF2Q15853 346 aaPredicted RBP1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 MAPK14Q16539 360 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 TPRXLQ17RH7 258 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 MESTQ5EB52 335 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 SPATA31B1PQ5VZV4 182 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 LINC00527Q9UJ94 153 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 AMMECR1Q9Y4X0 333 aaPredicted RBP1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 COL4A1P02462 1669 aa1.31□□□□□ -2.2
RNU6-88P-201ENST00000606801 MYH11P35749 1972 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 THSD7AQ9UPZ6 1657 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 A0A0G2JQZ4 141 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 SCN2BO60939 215 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 OR13C7P0DN81 318 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 ESDP10768 282 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 OPRM1P35372 400 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 PPP1CCP36873 323 aaKnown RBP1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 DAPP51397 102 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 TSPEAR-AS2P59090 65 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 SLC35A2P78381 396 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 PMS2P3Q13401 168 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 ZNHIT3Q15649 155 aaPredicted RBP1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 RASL11AQ6T310 242 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 PLCZ1Q86YW0 608 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 BLIDQ8IZY5 108 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 CCDC12Q8WUD4 166 aaPredicted RBP1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 TNFAIP8L1Q8WVP5 186 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 MAP3K19Q56UN5 1328 aa1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 LRPPRCP42704 1394 aaKnown RBP1.3□□□□□ -2.2
RNU6-88P-201ENST00000606801 LINC00862A6NCI5 91 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 ERICH4A6NGS2 130 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 HSBP1L1C9JCN9 74 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 FNDC10F2Z333 226 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 H3BRN7 92 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 ADAP1O75689 374 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 IGLV3-27P01718 113 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 CCL3P10147 92 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 LPAR6P43657 344 aa1.29□□□□□ -2.2
RNU6-88P-201ENST00000606801 AKR1C2P52895 323 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms