RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 HSPB9Q9BQS6 159 aa12.9□□□□□ -0.34
TUBE1-206ENST00000603722 MRPL20Q9BYC9 149 aaKnown RBP12.9□□□□□ -0.34
TUBE1-206ENST00000603722 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
TUBE1-206ENST00000603722 PLGRKTQ9HBL7 147 aa12.9□□□□□ -0.34
TUBE1-206ENST00000603722 ABRACLQ9P1F3 81 aa12.9□□□□□ -0.34
TUBE1-206ENST00000603722 YPEL1O60688 119 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 RGS11O94810 467 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 BLVRBP30043 206 aaPredicted RBP12.89□□□□□ -0.35
TUBE1-206ENST00000603722 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 MRPL41Q8IXM3 137 aaKnown RBP12.89□□□□□ -0.35
TUBE1-206ENST00000603722 ODF3L1Q8IXM7 274 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 FAM71E2Q8N5Q1 922 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 COMMD1Q8N668 190 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 KLHL30-AS1Q8NEE0 82 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 YPEL2Q96QA6 119 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 LPAR5Q9H1C0 372 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 ISYNA1Q9NPH2 558 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 ZFP57Q9NU63 452 aa12.89□□□□□ -0.35
TUBE1-206ENST00000603722 AK6Q9Y3D8 172 aaKnown RBP12.89□□□□□ -0.35
TUBE1-206ENST00000603722 ERICH4A6NGS2 130 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 SLC17A2O00624 439 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 RRP9O43818 475 aaKnown RBP12.88□□□□□ -0.35
TUBE1-206ENST00000603722 ARL6IP5O75915 188 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 NAPSAO96009 420 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 CD37P11049 281 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 SLC2A2P11168 524 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-206ENST00000603722 ARSBP15848 533 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 CPEP16870 476 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 PSMA1P25786 263 aaKnown RBP12.88□□□□□ -0.35
TUBE1-206ENST00000603722 CALRP27797 417 aaKnown RBP12.88□□□□□ -0.35
TUBE1-206ENST00000603722 OR3A3P47888 321 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 MMDQ15546 238 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 TRAM1Q15629 374 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 TEX38Q6PEX7 206 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 PRSS48Q7RTY5 328 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 OR2AK2Q8NG84 335 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 CNBD2Q96M20 576 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 NABP2Q9BQ15 211 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
TUBE1-206ENST00000603722 PLEKHJ1Q9NW61 149 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
TUBE1-206ENST00000603722 SAA2-SAA4A0A096LPE2 208 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 ST8SIA5O15466 376 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 SOCS1O15524 211 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 SAA2P0DJI9 122 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-206ENST00000603722 SOX6P35712 828 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 THBS3P49746 956 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 CLDN12P56749 244 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 FABP5Q01469 135 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 RAB11BQ15907 218 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 PNLIPRP3Q17RR3 467 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 ZNF880Q6PDB4 577 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 LCNL1Q6ZST4 164 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 ZNF833PQ6ZTB9 187 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 MOB1BQ7L9L4 216 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 MGLLQ99685 303 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 HDHD3Q9BSH5 251 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-206ENST00000603722 GON7Q9BXV9 100 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 IFI27L2Q9H2X8 130 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 STEAP1Q9UHE8 339 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 ZNF107Q9UII5 783 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-206ENST00000603722 AK3Q9UIJ7 227 aa12.87□□□□□ -0.35
TUBE1-206ENST00000603722 DUS4LO95620 317 aaKnown RBP12.86□□□□□ -0.35
TUBE1-206ENST00000603722 RPLP1P05386 114 aaKnown RBP12.86□□□□□ -0.35
TUBE1-206ENST00000603722 VDAC1P21796 283 aa12.86□□□□□ -0.35
TUBE1-206ENST00000603722 SLC6A1P30531 599 aa12.86□□□□□ -0.35
TUBE1-206ENST00000603722 HOXD3P31249 432 aaPredicted RBP12.86□□□□□ -0.35
TUBE1-206ENST00000603722 HSPA13P48723 471 aa12.86□□□□□ -0.35
TUBE1-206ENST00000603722 LY6G6FQ5SQ64 297 aa12.86□□□□□ -0.35
TUBE1-206ENST00000603722 ZNF695Q8IW36 515 aa12.86□□□□□ -0.35
TUBE1-206ENST00000603722 DUX3Q96PT4 197 aa12.86□□□□□ -0.35
TUBE1-206ENST00000603722 CNTFRP26992 372 aa12.85□□□□□ -0.35
TUBE1-206ENST00000603722 MYCNOSP40205 109 aa12.85□□□□□ -0.35
TUBE1-206ENST00000603722 ACTBP60709 375 aa12.85□□□□□ -0.35
TUBE1-206ENST00000603722 CFHR3Q02985 330 aa12.85□□□□□ -0.35
TUBE1-206ENST00000603722 TBCEQ15813 527 aaPredicted RBP12.85□□□□□ -0.35
TUBE1-206ENST00000603722 CXorf66Q5JRM2 361 aaPredicted RBP12.85□□□□□ -0.35
TUBE1-206ENST00000603722 ZNF367Q7RTV3 350 aa12.85□□□□□ -0.35
TUBE1-206ENST00000603722 RITA1Q96K30 269 aa12.85□□□□□ -0.35
TUBE1-206ENST00000603722 ZNF251Q9BRH9 671 aa12.85□□□□□ -0.35
TUBE1-206ENST00000603722 PARP12Q9H0J9 701 aaKnown RBP12.85□□□□□ -0.35
TUBE1-206ENST00000603722 TRBV6-6A0A0A6YYG2 114 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 FOXI3A8MTJ6 420 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-206ENST00000603722 VEGFCP49767 419 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 KRTAP10-11P60412 298 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 HLA-DRB3P79483 266 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 FOXE3Q13461 319 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 RPL39P5Q59GN2 51 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 HES5Q5TA89 166 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 FAM89BQ8N5H3 189 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 FAM3DQ96BQ1 224 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 ARHGAP5-AS1Q96IT6 56 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 P2RX4Q99571 388 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 RIMS4Q9H426 269 aaPredicted RBP12.84□□□□□ -0.35
TUBE1-206ENST00000603722 ACOT13Q9NPJ3 140 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 C12orf4Q9NQ89 552 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 PIPOXQ9P0Z9 390 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 OR1A1Q9P1Q5 309 aa12.84□□□□□ -0.35
TUBE1-206ENST00000603722 SLC23A1Q9UHI7 598 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms