RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 DUS4LO95620 317 aaKnown RBP17.81■□□□□ 0.44
SSBP4-209ENST00000601357 CPEP16870 476 aa17.81■□□□□ 0.44
SSBP4-209ENST00000601357 THBS3P49746 956 aa17.81■□□□□ 0.44
SSBP4-209ENST00000601357 RPS25P62851 125 aaKnown RBP17.81■□□□□ 0.44
SSBP4-209ENST00000601357 MLLT11Q13015 90 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-209ENST00000601357 TRAM1Q15629 374 aa17.81■□□□□ 0.44
SSBP4-209ENST00000601357 MRPL41Q8IXM3 137 aaKnown RBP17.81■□□□□ 0.44
SSBP4-209ENST00000601357 SVOPQ8N4V2 548 aa17.81■□□□□ 0.44
SSBP4-209ENST00000601357 OR51D1Q8NGF3 324 aa17.81■□□□□ 0.44
SSBP4-209ENST00000601357 RASL11BQ9BPW5 248 aa17.81■□□□□ 0.44
SSBP4-209ENST00000601357 HSPB9Q9BQS6 159 aa17.81■□□□□ 0.44
SSBP4-209ENST00000601357 LPAR5Q9H1C0 372 aa17.81■□□□□ 0.44
SSBP4-209ENST00000601357 SLC17A2O00624 439 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 HSMCR30P0CW71 290 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 PSMA1P25786 263 aaKnown RBP17.8■□□□□ 0.44
SSBP4-209ENST00000601357 BLVRBP30043 206 aaPredicted RBP17.8■□□□□ 0.44
SSBP4-209ENST00000601357 TEX38Q6PEX7 206 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 ZNF833PQ6ZTB9 187 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 PRSS48Q7RTY5 328 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 FAM89BQ8N5H3 189 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 MRAPQ8TCY5 172 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 GON7Q9BXV9 100 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 ZNF580Q9UK33 172 aa17.8■□□□□ 0.44
SSBP4-209ENST00000601357 FOXI3A8MTJ6 420 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-209ENST00000601357 ARL6IP5O75915 188 aa17.79■□□□□ 0.44
SSBP4-209ENST00000601357 RGS11O94810 467 aa17.79■□□□□ 0.44
SSBP4-209ENST00000601357 CFHR3Q02985 330 aa17.79■□□□□ 0.44
SSBP4-209ENST00000601357 PNLIPRP3Q17RR3 467 aa17.79■□□□□ 0.44
SSBP4-209ENST00000601357 C8orf86Q6ZUL3 223 aa17.79■□□□□ 0.44
SSBP4-209ENST00000601357 RNF152Q8N8N0 203 aa17.79■□□□□ 0.44
SSBP4-209ENST00000601357 NABP2Q9BQ15 211 aa17.79■□□□□ 0.44
SSBP4-209ENST00000601357 IFI27L2Q9H2X8 130 aa17.79■□□□□ 0.44
SSBP4-209ENST00000601357 TRBV6-6A0A0A6YYG2 114 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 SOCS1O15524 211 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 IGF1P05019 195 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 ARSBP15848 533 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 SOX6P35712 828 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 FABP5Q01469 135 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 P2RY14Q15391 338 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 KLHL30-AS1Q8NEE0 82 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 P2RX4Q99571 388 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 MGLLQ99685 303 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 MRPL20Q9BYC9 149 aaKnown RBP17.78■□□□□ 0.44
SSBP4-209ENST00000601357 PLEKHJ1Q9NW61 149 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 ABRACLQ9P1F3 81 aa17.78■□□□□ 0.44
SSBP4-209ENST00000601357 SAA2-SAA4A0A096LPE2 208 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 SAA2P0DJI9 122 aaPredicted RBP17.77■□□□□ 0.44
SSBP4-209ENST00000601357 MYCNOSP40205 109 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 MAP2K4P45985 399 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 OR3A3P47888 321 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 EGFEM1PQ0D2K5 195 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 FOXE3Q13461 319 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 MOB1BQ7L9L4 216 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 ZNF695Q8IW36 515 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 OR2AK2Q8NG84 335 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 RITA1Q96K30 269 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 URM1Q9BTM9 101 aaKnown RBP17.77■□□□□ 0.44
SSBP4-209ENST00000601357 CCDC90BQ9GZT6 254 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 VCX3BQ9H321 246 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 PLGRKTQ9HBL7 147 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 HSF4Q9ULV5 492 aa17.77■□□□□ 0.44
SSBP4-209ENST00000601357 AK6Q9Y3D8 172 aaKnown RBP17.77■□□□□ 0.44
SSBP4-209ENST00000601357 NUDT19A8MXV4 375 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 RRP9O43818 475 aaKnown RBP17.76■□□□□ 0.43
SSBP4-209ENST00000601357 IGHG4P01861 327 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 RPLP1P05386 114 aaKnown RBP17.76■□□□□ 0.43
SSBP4-209ENST00000601357 KRTAP10-11P60412 298 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 MMDQ15546 238 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 FAM71F2Q6NXP2 309 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 IZUMO2Q6UXV1 221 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 IL1F10Q8WWZ1 152 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 ZNF251Q9BRH9 671 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 RIMS4Q9H426 269 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-209ENST00000601357 STEAP1Q9UHE8 339 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 AK3Q9UIJ7 227 aa17.76■□□□□ 0.43
SSBP4-209ENST00000601357 ELANEP08246 267 aa17.75■□□□□ 0.43
SSBP4-209ENST00000601357 CALRP27797 417 aaKnown RBP17.75■□□□□ 0.43
SSBP4-209ENST00000601357 HSPA13P48723 471 aa17.75■□□□□ 0.43
SSBP4-209ENST00000601357 TMEM50BP56557 158 aa17.75■□□□□ 0.43
SSBP4-209ENST00000601357 ACTBP60709 375 aa17.75■□□□□ 0.43
SSBP4-209ENST00000601357 TBCEQ15813 527 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-209ENST00000601357 RAB11BQ15907 218 aa17.75■□□□□ 0.43
SSBP4-209ENST00000601357 HDHD3Q9BSH5 251 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-209ENST00000601357 CHMP1AQ9HD42 196 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-209ENST00000601357 ACOT13Q9NPJ3 140 aa17.75■□□□□ 0.43
SSBP4-209ENST00000601357 ZNF107Q9UII5 783 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-209ENST00000601357 SLC2A2P11168 524 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-209ENST00000601357 CDX1P47902 265 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-209ENST00000601357 LCNL1Q6ZST4 164 aa17.74■□□□□ 0.43
SSBP4-209ENST00000601357 RAX2Q96IS3 184 aa17.74■□□□□ 0.43
SSBP4-209ENST00000601357 PARP12Q9H0J9 701 aaKnown RBP17.74■□□□□ 0.43
SSBP4-209ENST00000601357 SLC23A1Q9UHI7 598 aa17.74■□□□□ 0.43
SSBP4-209ENST00000601357 K7EIL1 84 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 ITGB1BP1O14713 200 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 RAB29O14966 203 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 LDLRAD4O15165 306 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 ST8SIA5O15466 376 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 HLA-DRB1P01911 266 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 VDAC1P21796 283 aa17.73■□□□□ 0.43
SSBP4-209ENST00000601357 CNTFRP26992 372 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms