RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 JPT1Q9UK76 154 aa13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 ZNF256Q9Y2P7 627 aaPredicted RBP13.97□□□□□ -0.17
CHMP2A-208ENST00000601220 DYNC2H1Q8NCM8 4307 aaKnown RBP13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 YPEL1O60688 119 aa13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 PDCD6O75340 191 aa13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 CRTAPO75718 401 aaPredicted RBP13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 OR3A3P47888 321 aa13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 RAB9AP51151 201 aa13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 ST3GAL4Q11206 333 aa13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 YPEL2Q96QA6 119 aa13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 ANKRD60Q9BZ19 345 aa13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 VSIG4Q9Y279 399 aa13.96□□□□□ -0.17
CHMP2A-208ENST00000601220 NBR2O15453 112 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 NDUFA3O95167 84 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 BAG2O95816 211 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 CHATP28329 748 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 CAPGP40121 348 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 INSL3P51460 131 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 ZNF616Q08AN1 781 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 LRRC36Q1X8D7 754 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 C5orf64Q2M2E5 130 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 UQCC2Q9BRT2 126 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 IFI27L2Q9H2X8 130 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 CHCHD3Q9NX63 227 aaKnown RBP13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 KCNIP1Q9NZI2 227 aa13.95□□□□□ -0.18
CHMP2A-208ENST00000601220 TRAV41A0A0B4J266 112 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 PNMA8CA0A1B0GUJ8 204 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 OR8U8P0C7N1 319 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 BLVRBP30043 206 aaPredicted RBP13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 CRIP2P52943 208 aaPredicted RBP13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 TAS2R43P59537 309 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 NDPQ00604 133 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 HMGN3Q15651 99 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 TTC23Q5W5X9 447 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 LIN54Q6MZP7 749 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 TMEM65Q6PI78 240 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 FAM46BQ96A09 425 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 OR5B12Q96R08 314 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 SULT4A1Q9BR01 284 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 ZNF251Q9BRH9 671 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 PARP11Q9NR21 331 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 TPSG1Q9NRR2 321 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 GHRLQ9UBU3 117 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 FBXO7Q9Y3I1 522 aa13.94□□□□□ -0.18
CHMP2A-208ENST00000601220 SAA2-SAA4A0A096LPE2 208 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 EFCAB10A6NFE3 127 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 SOX15O60248 233 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 SAA2P0DJI9 122 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 EGR2P11161 476 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 CELP19835 753 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 MED21Q13503 144 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 NKAIN3Q8N8D7 197 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 FBLIM1Q8WUP2 373 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 CYGBQ8WWM9 190 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 DCUN1D4Q92564 292 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 ALX4Q9H161 411 aaPredicted RBP13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 CNOT2Q9NZN8 540 aaKnown RBP13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 LRRC42Q9Y546 428 aa13.93□□□□□ -0.18
CHMP2A-208ENST00000601220 CT45A6P0DMU7 189 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 CT45A5P0DMU8 189 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 CT45A7P0DMV0 189 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 CD37P11049 281 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 INSL4Q14641 139 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 OR10K2Q6IF99 312 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 ZNF880Q6PDB4 577 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 SETD9Q8NE22 299 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 GALMQ96C23 342 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 FAAP24Q9BTP7 215 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 PSORS1C1Q9UIG5 152 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 SMAD5-AS1Q9Y6J3 95 aa13.92□□□□□ -0.18
CHMP2A-208ENST00000601220 C3orf84H3BNL1 204 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 FCN1O00602 326 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 RGS11O94810 467 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 GNAO1P09471 354 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 WNT4P56705 351 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 FAM71F2Q6NXP2 309 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 LRRTM1Q86UE6 522 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 ZNF429Q86V71 674 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 SBSPONQ8IVN8 264 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 DHRSXQ8N5I4 330 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 NANOGP1Q8N7R0 232 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 DLX4Q92988 240 aaPredicted RBP13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 TOLLIPQ9H0E2 274 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 PLCXD1Q9NUJ7 323 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 FKBP14Q9NWM8 211 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 NUBP2Q9Y5Y2 271 aa13.91□□□□□ -0.18
CHMP2A-208ENST00000601220 RYR2Q92736 4967 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 OVOL1O14753 267 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 ST8SIA5O15466 376 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 NAPSAO96009 420 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 SNRPBP14678 240 aaKnown RBP13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 HTR2CP28335 458 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 RPS27AP62979 156 aaKnown RBP13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 CX3CL1P78423 397 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 QRFPP83859 136 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 C1orf100Q5SVJ3 147 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 FAM27D1Q5T7N8 215 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 ZNF660Q6AZW8 331 aaPredicted RBP13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 C6orf201Q7Z4U5 140 aa13.9□□□□□ -0.18
CHMP2A-208ENST00000601220 SVOPQ8N4V2 548 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms