RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 BTBD17A6NE02 478 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 BUB1B-PAK6H3BSN5 160 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 GABARAPH6UMI1 98 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 RCVRNP35243 200 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 PYDC2Q56P42 97 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 IGSF11Q5DX21 431 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 GVQW1Q8N7I0 195 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 OR5AP2Q8NGF4 316 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 OR6Q1Q8NGQ2 317 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 RPEQ96AT9 228 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 ABHD1Q96SE0 405 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 SLC6A7Q99884 636 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 CABLES2Q9BTV7 478 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 ABHD14AQ9BUJ0 271 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 ABCB10Q9NRK6 738 aa13.57□□□□□ -0.24
USHBP1-210ENST00000600286 DSCAML1Q8TD84 2053 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 TRBV6-7A0A0A0MS04 114 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 A0A0A6YYJ9 748 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 A0A0U1RQK1 487 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 OOSP1A8MZH6 123 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 ITGB1BP1O14713 200 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 CTDSPLO15194 276 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 IGLV1-47P01700 117 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 SSBP1Q04837 148 aaKnown RBP13.56□□□□□ -0.24
USHBP1-210ENST00000600286 DEFB112Q30KQ8 113 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 Q6ZPA2 131 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 SLC25A48Q6ZT89 311 aaKnown RBP13.56□□□□□ -0.24
USHBP1-210ENST00000600286 C5orf24Q7Z6I8 188 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 BCL6BQ8N143 479 aaPredicted RBP13.56□□□□□ -0.24
USHBP1-210ENST00000600286 OR4P4Q8NGL7 312 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 OR5H2Q8NGV7 314 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 GCDHQ92947 438 aaPredicted RBP13.56□□□□□ -0.24
USHBP1-210ENST00000600286 DPAGT1Q9H3H5 408 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 RDH8Q9NYR8 311 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 PTTG2Q9NZH5 202 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 ZNF221Q9UK13 617 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 HILPDAQ9Y5L2 63 aa13.56□□□□□ -0.24
USHBP1-210ENST00000600286 ATRQ13535 2644 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 A0A1W2PPE3 182 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 TCF21O43680 179 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 GAPDHP04406 335 aaKnown RBP13.55□□□□□ -0.24
USHBP1-210ENST00000600286 FCER2P06734 321 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 BRS3P32247 399 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 BAMBIQ13145 260 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 GNMTQ14749 295 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 CDK10Q15131 360 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 SSX2Q16385 188 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 ACTBL2Q562R1 376 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 RNASE12Q5GAN4 147 aaKnown RBP13.55□□□□□ -0.24
USHBP1-210ENST00000600286 CT45A1Q5HYN5 189 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 LINC00299Q6ZSB3 139 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 LHFPL4Q7Z7J7 247 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 CCDC190Q86UF4 302 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 LYG1Q8N1E2 194 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 OR52I2Q8NH67 350 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 CT45A3Q8NHU0 189 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 FAM216AQ8WUB2 273 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 TOMM40LQ969M1 308 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 S1PR3Q99500 378 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 MEGF9Q9H1U4 602 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 TAS2R8Q9NYW2 309 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 PIPOXQ9P0Z9 390 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 OR1A1Q9P1Q5 309 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 MXRA5Q9NR99 2828 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 COL6A5A8TX70 2615 aa13.55□□□□□ -0.24
USHBP1-210ENST00000600286 IGKV1-6A0A0C4DH72 117 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 RAB29O14966 203 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 IFNA6P05013 189 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 OR5H8P0DN80 308 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 NAT1P18440 290 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 TPTE2P1Q5T6R2 138 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 SIGLECL1Q8N7X8 197 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 SMIM4Q8WVI0 70 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 SSMEM1Q8WWF3 244 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 TOLLIPQ9H0E2 274 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 MTFP1Q9UDX5 166 aa13.54□□□□□ -0.24
USHBP1-210ENST00000600286 IGKV1D-8A0A087WSZ0 117 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 ZNF736B4DX44 427 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-210ENST00000600286 TXNL1O43396 289 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 GSTZ1O43708 216 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-210ENST00000600286 SLC22A5O76082 557 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 CSF1P09603 554 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 TBPP20226 339 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 HLA-DMAP28067 261 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 ETV6P41212 452 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 LUMP51884 338 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-210ENST00000600286 TSPAN5P62079 268 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 ZNF45Q02386 682 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 HERPUD1Q15011 391 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 AANATQ16613 207 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 Q6YL49 198 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 TMEM17Q86X19 198 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 ZNF439Q8NDP4 499 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 SOSTQ9BQB4 213 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 C11orf54Q9H0W9 315 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-210ENST00000600286 EHFQ9NZC4 300 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 ZNF107Q9UII5 783 aaPredicted RBP13.53□□□□□ -0.24
USHBP1-210ENST00000600286 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
USHBP1-210ENST00000600286 PMP2P02689 132 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms