RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 EXOSC1Q9Y3B2 195 aaKnown RBP16.39■□□□□ 0.21
PNKP-212ENST00000599454 TRAV8-7A0A075B6U6 113 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 LINC01619G3V211 115 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 NDUFA3O95167 84 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 FRMD6-AS1P0C7T7 363 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 GP9P14770 177 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 MGMTP16455 207 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 CNTFRP26992 372 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 GABPB1Q06547 395 aaPredicted RBP16.38■□□□□ 0.21
PNKP-212ENST00000599454 DMKNQ6E0U4 476 aaPredicted RBP16.38■□□□□ 0.21
PNKP-212ENST00000599454 AWAT2Q6E213 333 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 ZNF833PQ6ZTB9 187 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 RITA1Q96K30 269 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 SLC29A1Q99808 456 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 SELENOIQ9C0D9 397 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 LRRC42Q9Y546 428 aa16.38■□□□□ 0.21
PNKP-212ENST00000599454 DYNC1I1O14576 645 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 WBP4O75554 376 aaKnown RBP16.37■□□□□ 0.21
PNKP-212ENST00000599454 LYL1P12980 280 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 SPNP16150 400 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 PPP1CCP36873 323 aaKnown RBP16.37■□□□□ 0.21
PNKP-212ENST00000599454 CRIP2P52943 208 aaPredicted RBP16.37■□□□□ 0.21
PNKP-212ENST00000599454 RPS11P62280 158 aaKnown RBP eCLIP16.37■□□□□ 0.21
PNKP-212ENST00000599454 MED21Q13503 144 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 GNMTQ14749 295 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 SMN1Q16637 294 aaKnown RBP16.37■□□□□ 0.21
PNKP-212ENST00000599454 ZNF660Q6AZW8 331 aaPredicted RBP16.37■□□□□ 0.21
PNKP-212ENST00000599454 FAM71F2Q6NXP2 309 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 OVCH2Q7RTZ1 564 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 OR52L2PQ8NGH6 319 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 DLX4Q92988 240 aaPredicted RBP16.37■□□□□ 0.21
PNKP-212ENST00000599454 Q96M66 194 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 TOLLIPQ9H0E2 274 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 BANF2Q9H503 90 aa16.37■□□□□ 0.21
PNKP-212ENST00000599454 DIMT1Q9UNQ2 313 aaKnown RBP16.37■□□□□ 0.21
PNKP-212ENST00000599454 FOXA2Q9Y261 457 aaPredicted RBP16.37■□□□□ 0.21
PNKP-212ENST00000599454 TRBV5-7A0A0A0MS05 114 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 UBE2QL1A1L167 161 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 LALBAP00709 142 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 LGALS1P09382 135 aaKnown RBP16.36■□□□□ 0.21
PNKP-212ENST00000599454 OR8U9P0C7N5 309 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 C19orf54Q5BKX5 351 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 ACSM6Q6P461 480 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 ZNF555Q8NEP9 628 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 MRPL30Q8TCC3 161 aaKnown RBP16.36■□□□□ 0.21
PNKP-212ENST00000599454 GALMQ96C23 342 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 PALMDQ9NP74 551 aa16.36■□□□□ 0.21
PNKP-212ENST00000599454 SAA2-SAA4A0A096LPE2 208 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 A0A1W2PN81 502 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 PDCD6O75340 191 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 CRTAPO75718 401 aaPredicted RBP16.35■□□□□ 0.21
PNKP-212ENST00000599454 MAS1P04201 325 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 SAA2P0DJI9 122 aaPredicted RBP16.35■□□□□ 0.21
PNKP-212ENST00000599454 CHRNA7P36544 502 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 SLURP1P55000 103 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 ECSCRQ19T08 205 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 SIGIRRQ6IA17 410 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 PYHIN1Q6K0P9 492 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 OR2AK2Q8NG84 335 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 PGLYRP3Q96LB9 341 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 CITED4Q96RK1 184 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 ALX4Q9H161 411 aaPredicted RBP16.35■□□□□ 0.21
PNKP-212ENST00000599454 TPSG1Q9NRR2 321 aa16.35■□□□□ 0.21
PNKP-212ENST00000599454 TNCP24821 2201 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 ARPC1BO15143 372 aaKnown RBP16.34■□□□□ 0.21
PNKP-212ENST00000599454 CAPGP40121 348 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 OR3A3P47888 321 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 NDPQ00604 133 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 TMEM267Q0VDI3 215 aaPredicted RBP16.34■□□□□ 0.21
PNKP-212ENST00000599454 NKAIN3Q8N8D7 197 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 FLYWCH2Q96CP2 140 aaKnown RBP16.34■□□□□ 0.21
PNKP-212ENST00000599454 OR14A2Q96R54 314 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 UQCC2Q9BRT2 126 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 GHRLQ9UBU3 117 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 RNF150Q9ULK6 438 aa16.34■□□□□ 0.21
PNKP-212ENST00000599454 SOX15O60248 233 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 TAS2R43P59537 309 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 PITPNAQ00169 270 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 DOC2BQ14184 412 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 C6orf141Q5SZD1 244 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 CD200R1LQ6Q8B3 271 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 LYPD6Q86Y78 171 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 ARPC1AQ92747 370 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 THRSPQ92748 146 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 OR4C12Q96R67 309 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 PIPOXQ9P0Z9 390 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 ABRACLQ9P1F3 81 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 STEAP1Q9UHE8 339 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 CLEC2DQ9UHP7 191 aa16.33■□□□□ 0.2
PNKP-212ENST00000599454 RYR2Q92736 4967 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 IGHV4OR15-8A0A075B7B6 117 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 A0A087WW49 117 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 LCE6AA0A183 80 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 OR5H14A6NHG9 310 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 RRHO14718 337 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 CX3CL1P78423 397 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 HMGN3Q15651 99 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 ZFP41Q8N8Y5 198 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 ZNF485Q8NCK3 441 aa16.32■□□□□ 0.2
PNKP-212ENST00000599454 TMEM80Q96HE8 168 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms