RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 NRIP2Q9BQI9 281 aa10.29□□□□□ -0.76
SCN8A-208ENST00000599343 IGHV3OR16-12A0A075B7B8 117 aa10.29□□□□□ -0.76
SCN8A-208ENST00000599343 OR2A4O95047 310 aa10.29□□□□□ -0.76
SCN8A-208ENST00000599343 LIFP15018 202 aa10.29□□□□□ -0.76
SCN8A-208ENST00000599343 PLP1P60201 277 aa10.29□□□□□ -0.76
SCN8A-208ENST00000599343 CARFQ8N187 725 aa10.29□□□□□ -0.76
SCN8A-208ENST00000599343 NFAM1Q8NET5 270 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-208ENST00000599343 PGLYRP4Q96LB8 373 aa10.29□□□□□ -0.76
SCN8A-208ENST00000599343 OR2A7Q96R45 310 aa10.29□□□□□ -0.76
SCN8A-208ENST00000599343 ECM29Q5VYK3 1845 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 SIAH2O43255 324 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 EIF3GO75821 320 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCN8A-208ENST00000599343 C1QL1O75973 258 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 RPL31P62899 125 aaKnown RBP10.28□□□□□ -0.76
SCN8A-208ENST00000599343 IBA57Q5T440 356 aaKnown RBP10.28□□□□□ -0.76
SCN8A-208ENST00000599343 CCL13Q99616 98 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 K7ERU9 68 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 C1QCP02747 245 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 HCP5Q6MZN7 132 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 TMEM52Q8NDY8 209 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 MYH14Q7Z406 1995 aaKnown RBP10.28□□□□□ -0.76
SCN8A-208ENST00000599343 IGKV3D-11A0A0A0MRZ8 115 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 TGIF2-C20orf24A0A0A6YYL0 155 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 IGHV5-10-1A0A0J9YXX1 117 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 IGKV3-11P04433 115 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 WDR25Q64LD2 544 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-208ENST00000599343 ZNF738Q8NE65 137 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 C16orf92Q96LL3 132 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 A0A1W2PPV9 198 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 CD160O95971 181 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 HPRT1P00492 218 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 SSTR5P35346 364 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 MMP16P51512 607 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 OIT3Q8WWZ8 545 aa10.28□□□□□ -0.76
SCN8A-208ENST00000599343 FABP2P12104 132 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 CKS2P33552 79 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 LHFPL5Q8TAF8 219 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 NPVFQ9HCQ7 196 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 KCNK7Q9Y2U2 307 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 F11RQ9Y624 299 aaKnown RBP10.27□□□□□ -0.76
SCN8A-208ENST00000599343 PTPRZ1P23471 2315 aaPredicted RBP10.27□□□□□ -0.76
SCN8A-208ENST00000599343 CCL8P80075 99 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 FXYD3Q14802 87 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 HERPUD1Q15011 391 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 PRDM14Q9GZV8 571 aa10.27□□□□□ -0.76
SCN8A-208ENST00000599343 ELF5Q9UKW6 265 aaPredicted RBP10.27□□□□□ -0.76
SCN8A-208ENST00000599343 ARID1AO14497 2285 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 PPIAL4EA0A075B759 164 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 PPIAL4DF5H284 164 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 K7N7A8 449 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 UPK3AO75631 287 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 PPIAL4FP0DN26 164 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 IL9P15248 144 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 TFF2Q03403 129 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 TMEM78Q5T7P6 136 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 RBKSQ9H477 322 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 PPIAL4AQ9Y536 164 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 NUBP1P53384 320 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 FBXW9Q5XUX1 488 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 AMMECR1LQ6DCA0 310 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 C8orf82Q6P1X6 216 aaPredicted RBP10.27□□□□□ -0.77
SCN8A-208ENST00000599343 INO80CQ6PI98 192 aaPredicted RBP10.27□□□□□ -0.77
SCN8A-208ENST00000599343 APOBEC4Q8WW27 367 aaKnown RBP10.27□□□□□ -0.77
SCN8A-208ENST00000599343 HSPB7Q9UBY9 170 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 CCL27Q9Y4X3 112 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 BTAF1O14981 1849 aa10.27□□□□□ -0.77
SCN8A-208ENST00000599343 TMEM238LA0A1B0GVL6 79 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 A0A1W2PP11 408 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 A6NJY4 79 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 A8MWL6 223 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 SPINT1O43278 529 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 NUDT3O95989 172 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 IGKV1D-16P01601 117 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 SCTP09683 121 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 WFIKKN1Q96NZ8 548 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 HIST1H4GQ99525 98 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 LINC00869P0C866 280 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 PEBP1P30086 187 aaKnown RBP10.26□□□□□ -0.77
SCN8A-208ENST00000599343 OR10J6PQ8NGY7 276 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 ZNF714Q96N38 554 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 MS4A5Q9H3V2 200 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 A0A1W2PPC1 479 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 C9orf172C9J069 976 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 TM4SF20Q53R12 229 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 FAM53AQ6NSI3 398 aaPredicted RBP10.26□□□□□ -0.77
SCN8A-208ENST00000599343 ZNF441Q8N8Z8 693 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 MRPL13Q9BYD1 178 aaKnown RBP10.26□□□□□ -0.77
SCN8A-208ENST00000599343 TRBV5-3A0A0A0MS03 114 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 EBLN2Q6P2I7 272 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 PQLC2Q6ZP29 291 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 OR1P1Q8NH06 330 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 ZNF721Q8TF20 911 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 GUCD1Q96NT3 240 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 GPHA2Q96T91 129 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 NEU1Q99519 415 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 RARRES2Q99969 163 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 TTTY12Q9BZ98 90 aa10.26□□□□□ -0.77
SCN8A-208ENST00000599343 MRPL18Q9H0U6 180 aaKnown RBP10.26□□□□□ -0.77
SCN8A-208ENST00000599343 METTL1Q9UBP6 276 aaKnown RBP10.26□□□□□ -0.77
SCN8A-208ENST00000599343 C16orf97H3BN30 126 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms