RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 GPN1Q9HCN4 374 aaPredicted RBP12.69□□□□□ -0.38
UPF1-206ENST00000598471 ITGB1BP2Q9UKP3 347 aa12.69□□□□□ -0.38
UPF1-206ENST00000598471 POLR3KQ9Y2Y1 108 aaPredicted RBP12.69□□□□□ -0.38
UPF1-206ENST00000598471 CENPEQ02224 2701 aa12.69□□□□□ -0.38
UPF1-206ENST00000598471 DSCAML1Q8TD84 2053 aa12.69□□□□□ -0.38
UPF1-206ENST00000598471 NAV2Q8IVL1 2488 aa12.69□□□□□ -0.38
UPF1-206ENST00000598471 ANKRD17O75179 2603 aaKnown RBP12.69□□□□□ -0.38
UPF1-206ENST00000598471 ITPR2Q14571 2701 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 APCP25054 2843 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 ABCA12Q86UK0 2595 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 IGKV1D-13A0A0B4J2D9 117 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 GPR31O00270 319 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 MMP23AO75900 390 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 IL5P05113 134 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 IGKV1-13P0DP09 117 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 ANXA7P20073 488 aaKnown RBP12.68□□□□□ -0.38
UPF1-206ENST00000598471 LOXL1Q08397 574 aaPredicted RBP12.68□□□□□ -0.38
UPF1-206ENST00000598471 MSMO1Q15800 293 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 TATDN3Q17R31 274 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 METTL11BQ5VVY1 283 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 FAHD2BQ6P2I3 314 aaPredicted RBP12.68□□□□□ -0.38
UPF1-206ENST00000598471 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 SLC25A42Q86VD7 318 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 FAHD2AQ96GK7 314 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 AKR1E2Q96JD6 320 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 Q96MF0 132 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 FOXC2Q99958 501 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 ABHD14AQ9BUJ0 271 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 SUCNR1Q9BXA5 334 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 PARP12Q9H0J9 701 aaKnown RBP12.68□□□□□ -0.38
UPF1-206ENST00000598471 TMEM133Q9H2Q1 129 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 C5orf66Q9H5L9 145 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 METTL8Q9H825 291 aaKnown RBP12.68□□□□□ -0.38
UPF1-206ENST00000598471 ZNF221Q9UK13 617 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 PSG11Q9UQ72 335 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 KPTNQ9Y664 436 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 MALRD1Q5VYJ5 2156 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 KIAA2026Q5HYC2 2103 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 NOTCH2Q04721 2471 aa12.68□□□□□ -0.38
UPF1-206ENST00000598471 A0A087X0M5 115 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 A0A1B0GX30 115 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 VGLL3A8MV65 326 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 FAM157AC9JC47 383 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 HSD17B6O14756 317 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 AKR1C4P17516 323 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 ARF6P62330 175 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 C4orf46Q504U0 113 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 TMEM128Q5BJH2 165 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 ZNF645Q8N7E2 425 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 C8orf31Q8N9H6 132 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 ZBTB34Q8NCN2 500 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 BEX2Q9BXY8 128 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 OR2D2Q9H210 308 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 GHITMQ9H3K2 345 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 BEX1Q9HBH7 125 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 CCL28Q9NRJ3 127 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 TACC2O95359 2948 aa12.67□□□□□ -0.38
UPF1-206ENST00000598471 B4DSR2 109 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 TOR1AO14656 332 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 ST8SIA5O15466 376 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 OR4E1P0C645 316 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 PI3P19957 117 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 CD34P28906 385 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 GNRHRP30968 328 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 GPR12P47775 334 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 GNG10P50151 68 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 DVL1P1P54792 670 aaPredicted RBP12.66□□□□□ -0.38
UPF1-206ENST00000598471 PIGPP57054 158 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 RND3P61587 244 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 PAX2Q02962 417 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 PHLDA2Q53GA4 152 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 FAM53AQ6NSI3 398 aaPredicted RBP12.66□□□□□ -0.38
UPF1-206ENST00000598471 GLDNQ6ZMI3 551 aaPredicted RBP12.66□□□□□ -0.38
UPF1-206ENST00000598471 SGPP2Q8IWX5 399 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 OR13D1Q8NGV5 346 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 OR9G1Q8NH87 305 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 TNFRSF14Q92956 283 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 LEAP2Q969E1 77 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 RTBDNQ9BSG5 229 aaPredicted RBP12.66□□□□□ -0.38
UPF1-206ENST00000598471 REG4Q9BYZ8 158 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 HEXA-AS1Q9H8Q6 139 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 LPAR2Q9HBW0 351 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 SLC2A9Q9NRM0 540 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 PDZD2O15018 2839 aa12.66□□□□□ -0.38
UPF1-206ENST00000598471 hCG_2014768A0A024R1R8 64 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 TEX13DA0A0J9YY54 714 aaPredicted RBP12.65□□□□□ -0.38
UPF1-206ENST00000598471 RNF212BA8MTL3 300 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 SNRPGP15A8MWD9 76 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 RNF223E7ERA6 249 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 CREBL2O60519 120 aaPredicted RBP12.65□□□□□ -0.38
UPF1-206ENST00000598471 IGHV3-7P01780 117 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 MSMBP08118 114 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 VSIG10L2P0DP72 767 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 ANXA3P12429 323 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 PRTN3P24158 256 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 IL3RAP26951 378 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 PRRX1P54821 245 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 ZNF818PQ6ZRF7 136 aa12.65□□□□□ -0.38
UPF1-206ENST00000598471 SLC25A48Q6ZT89 311 aaKnown RBP12.65□□□□□ -0.38
UPF1-206ENST00000598471 ABHD12Q8N2K0 398 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms