RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 ZNF736B4DX44 427 aaPredicted RBP18.17■□□□□ 0.5
IRF3-220ENST00000598108 IGKV1D-33P01593 117 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 IGKV1-33P01594 117 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 SNRPBP14678 240 aaKnown RBP18.17■□□□□ 0.5
IRF3-220ENST00000598108 IL3RAP26951 378 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 ABCA11PQ4W5N1 156 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 SFXN4Q6P4A7 337 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 MOB1BQ7L9L4 216 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 ODF3L1Q8IXM7 274 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 LYG1Q8N1E2 194 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 C11orf44Q8N8P7 122 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 AKR1E2Q96JD6 320 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 ABHD14AQ9BUJ0 271 aa18.17■□□□□ 0.5
IRF3-220ENST00000598108 TRIM64CA6NLI5 447 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 SCTP09683 121 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 TGFBR1P36897 503 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 HES1Q14469 280 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 HERPUD1Q15011 391 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 LY6G6FQ5SQ64 297 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 WNT10AQ9GZT5 417 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 PARP12Q9H0J9 701 aaKnown RBP18.16■□□□□ 0.5
IRF3-220ENST00000598108 ATG5Q9H1Y0 275 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 MGAM2Q2M2H8 2515 aa18.16■□□□□ 0.5
IRF3-220ENST00000598108 PKD1L1Q8TDX9 2849 aa18.15■□□□□ 0.5
IRF3-220ENST00000598108 MFNGO00587 321 aa18.15■□□□□ 0.5
IRF3-220ENST00000598108 HIST1H1DP16402 221 aaKnown RBP18.15■□□□□ 0.5
IRF3-220ENST00000598108 TMEM11P17152 192 aa18.15■□□□□ 0.5
IRF3-220ENST00000598108 HLA-DRB3P79483 266 aa18.15■□□□□ 0.5
IRF3-220ENST00000598108 EBI3Q14213 229 aa18.15■□□□□ 0.5
IRF3-220ENST00000598108 WIPF2Q8TF74 440 aaPredicted RBP18.15■□□□□ 0.5
IRF3-220ENST00000598108 ELF5Q9UKW6 265 aaPredicted RBP18.15■□□□□ 0.5
IRF3-220ENST00000598108 A0A075B6Q4 140 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 IGKV1-6A0A0C4DH72 117 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 METTL21EPA6NDL7 271 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 LANCL1O43813 399 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 RGS11O94810 467 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 LPLP06858 475 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 VDAC2P45880 294 aaPredicted RBP18.14■□□□□ 0.49
IRF3-220ENST00000598108 TGIF2LXQ8IUE1 241 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 EAF1Q96JC9 268 aaPredicted RBP18.14■□□□□ 0.49
IRF3-220ENST00000598108 VCX3AQ9NNX9 186 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 OR1A1Q9P1Q5 309 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 MOB4Q9Y3A3 225 aa18.14■□□□□ 0.49
IRF3-220ENST00000598108 CMYA5Q8N3K9 4069 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 TRDCB7Z8K6 153 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 CD3GP09693 182 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 CD1BP29016 333 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 OR3A3P47888 321 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 ARSJQ5FYB0 599 aaPredicted RBP18.13■□□□□ 0.49
IRF3-220ENST00000598108 IZUMO1Q8IYV9 350 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 Q8N6K4 173 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 LGALS14Q8TCE9 139 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 IFI27L2Q9H2X8 130 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 SLC23A1Q9UHI7 598 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 MGAT4AQ9UM21 535 aa18.13■□□□□ 0.49
IRF3-220ENST00000598108 M0QZK8 103 aa18.12■□□□□ 0.49
IRF3-220ENST00000598108 ST8SIA5O15466 376 aa18.12■□□□□ 0.49
IRF3-220ENST00000598108 AIREO43918 545 aa18.12■□□□□ 0.49
IRF3-220ENST00000598108 IDNKQ5T6J7 187 aa18.12■□□□□ 0.49
IRF3-220ENST00000598108 C5orf56Q8N8D9 126 aa18.12■□□□□ 0.49
IRF3-220ENST00000598108 OR2AK2Q8NG84 335 aa18.12■□□□□ 0.49
IRF3-220ENST00000598108 OR5H6Q8NGV6 325 aa18.12■□□□□ 0.49
IRF3-220ENST00000598108 MAFIPQ8WZ33 124 aa18.12■□□□□ 0.49
IRF3-220ENST00000598108 ZNF230Q9UIE0 474 aaPredicted RBP18.12■□□□□ 0.49
IRF3-220ENST00000598108 SERPINE3A8MV23 424 aa18.11■□□□□ 0.49
IRF3-220ENST00000598108 FCGR3AP08637 254 aa18.11■□□□□ 0.49
IRF3-220ENST00000598108 CD28P10747 220 aa18.11■□□□□ 0.49
IRF3-220ENST00000598108 CEACAM6P40199 344 aa18.11■□□□□ 0.49
IRF3-220ENST00000598108 LSM3P62310 102 aaKnown RBP18.11■□□□□ 0.49
IRF3-220ENST00000598108 TIMM50Q3ZCQ8 353 aa18.11■□□□□ 0.49
IRF3-220ENST00000598108 CDNFQ49AH0 187 aa18.11■□□□□ 0.49
IRF3-220ENST00000598108 TREML4Q6UXN2 200 aa18.11■□□□□ 0.49
IRF3-220ENST00000598108 MRPL20Q9BYC9 149 aaKnown RBP18.11■□□□□ 0.49
IRF3-220ENST00000598108 C11orf54Q9H0W9 315 aaPredicted RBP18.11■□□□□ 0.49
IRF3-220ENST00000598108 PLSCR3Q9NRY6 295 aa18.11■□□□□ 0.49
IRF3-220ENST00000598108 VWFP04275 2813 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 SAA2-SAA4A0A096LPE2 208 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 M0QZ24 198 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 TXNL1O43396 289 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 SAA2P0DJI9 122 aaPredicted RBP18.1■□□□□ 0.49
IRF3-220ENST00000598108 SMIM18P0DKX4 95 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 ZBTB25P24278 435 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 MRPS15P82914 257 aaKnown RBP18.1■□□□□ 0.49
IRF3-220ENST00000598108 C9orf152Q5JTZ5 239 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 ZNF833PQ6ZTB9 187 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 OR2T10Q8NGZ9 312 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 ZNF251Q9BRH9 671 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 AGMATQ9BSE5 352 aa18.1■□□□□ 0.49
IRF3-220ENST00000598108 WNK1Q9H4A3 2382 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 PEX14O75381 377 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 TSPAN15O95858 294 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 MOSP00540 346 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 GSTT2P0CG29 244 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 GSTT2BP0CG30 244 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 RPS19P39019 145 aaKnown RBP18.09■□□□□ 0.49
IRF3-220ENST00000598108 LSAMPQ13449 338 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 ARFRP1Q13795 201 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 SLC25A38Q96DW6 304 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 ABHD14BQ96IU4 210 aa18.09■□□□□ 0.49
IRF3-220ENST00000598108 NABP2Q9BQ15 211 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms