RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 TAS2R20P59543 309 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 RPL15P61313 204 aaKnown RBP16.39■□□□□ 0.21
PNKP-211ENST00000598020 HERPUD1Q15011 391 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 IZUMO1Q8IYV9 350 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 ST6GALNAC6Q969X2 333 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 RPEQ96AT9 228 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 CHIAQ9BZP6 476 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 VPREB3Q9UKI3 123 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 CCDC160A6NGH7 325 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 H3BUX3 64 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 TPPPO94811 219 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 HLA-DQB1P01920 261 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 IL3RAP26951 378 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 RAB7AP51149 207 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 ARHGDIBP52566 201 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 ZNF816Q0VGE8 651 aaPredicted RBP16.38■□□□□ 0.21
PNKP-211ENST00000598020 MAFIPQ8WZ33 124 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 ABHD14AQ9BUJ0 271 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 ST6GALNAC5Q9BVH7 336 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 SLIRPQ9GZT3 109 aaKnown RBP16.38■□□□□ 0.21
PNKP-211ENST00000598020 NDUFA13Q9P0J0 144 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 SLC23A1Q9UHI7 598 aa16.38■□□□□ 0.21
PNKP-211ENST00000598020 COL6A5A8TX70 2615 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 IGKV1D-8A0A087WSZ0 117 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 TRBV6-7A0A0A0MS04 114 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 CEACAM6P40199 344 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 CBX5P45973 191 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 OR8H3Q8N146 312 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 OR2AK2Q8NG84 335 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 TOMM40LQ969M1 308 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 NXF2Q9GZY0 626 aaKnown RBP16.37■□□□□ 0.21
PNKP-211ENST00000598020 GHITMQ9H3K2 345 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 ABCB10Q9NRK6 738 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 OR1A1Q9P1Q5 309 aa16.37■□□□□ 0.21
PNKP-211ENST00000598020 HSPA12AO43301 675 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 GAPDHP04406 335 aaKnown RBP16.36■□□□□ 0.21
PNKP-211ENST00000598020 CTXN2P0C2S0 81 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 BRS3P32247 399 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 DIAPH2-AS1Q14236 149 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 IGSF11Q5DX21 431 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 LIAT1Q6ZQX7 453 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 HOGA1Q86XE5 327 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 EDARADDQ8WWZ3 215 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 AGMATQ9BSE5 352 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 MIXL1Q9H2W2 232 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 TNFRSF19Q9NS68 423 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 ADAM30Q9UKF2 790 aa16.36■□□□□ 0.21
PNKP-211ENST00000598020 A0A1W2PPI3 338 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 FAM25AB3EWG3 89 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 FAM25CB3EWG5 89 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 FAM25GB3EWG6 89 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 CTDSP2O14595 271 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 HSD17B6O14756 317 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 GPR137BO60478 399 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 PTHLHP12272 177 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 RAB13P51153 203 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 HABP2Q14520 560 aaPredicted RBP16.35■□□□□ 0.21
PNKP-211ENST00000598020 PLA1AQ53H76 456 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 CNIH2Q6PI25 160 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 ODF3L1Q8IXM7 274 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.35■□□□□ 0.21
PNKP-211ENST00000598020 DTX3Q8N9I9 347 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 OR10J5Q8NHC4 309 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 C11orf54Q9H0W9 315 aaPredicted RBP16.35■□□□□ 0.21
PNKP-211ENST00000598020 IFI27L2Q9H2X8 130 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 ANXA10Q9UJ72 324 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 ANAPC10Q9UM13 185 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 TCF19Q9Y242 345 aa16.35■□□□□ 0.21
PNKP-211ENST00000598020 FBN1P35555 2871 aaKnown RBP16.34■□□□□ 0.21
PNKP-211ENST00000598020 A6NDX4 124 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 FAM181BA6NEQ2 426 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 FAM90A9PA6NNJ1 464 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 RNF212BA8MTL3 300 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 TXNL1O43396 289 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 LANCL1O43813 399 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 PRSS3P35030 304 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 THNSL2Q86YJ6 484 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 LYG1Q8N1E2 194 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 RTN4IP1Q8WWV3 396 aaPredicted RBP16.34■□□□□ 0.21
PNKP-211ENST00000598020 DGCR14Q96DF8 476 aaKnown RBP16.34■□□□□ 0.21
PNKP-211ENST00000598020 C19orf24Q9BVV8 132 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 PARP12Q9H0J9 701 aaKnown RBP16.34■□□□□ 0.21
PNKP-211ENST00000598020 SCPEP1Q9HB40 452 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 RDH8Q9NYR8 311 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 EXTL2Q9UBQ6 330 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 PITPNC1Q9UKF7 332 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 A3GALT2U3KPV4 340 aa16.34■□□□□ 0.21
PNKP-211ENST00000598020 IGHV1-3A0A0C4DH29 117 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 BET1O15155 118 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 RGS5O15539 181 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 LPLP06858 475 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 FAM71F2Q6NXP2 309 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 GVQW1Q8N7I0 195 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 BEST4Q8NFU0 473 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 GPX8Q8TED1 209 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 C15orf40Q8WUR7 153 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 CFHR4Q92496 578 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 MDFIQ99750 246 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 RAB18Q9NP72 206 aa16.33■□□□□ 0.2
PNKP-211ENST00000598020 PIPOXQ9P0Z9 390 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms