RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 FCGR3AP08637 254 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 GSTT2P0CG29 244 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 GSTT2BP0CG30 244 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 CEACAM6P40199 344 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 RAB7AP51149 207 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 DYNLT3P51808 116 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 GNG2P59768 71 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 RPL15P61313 204 aaKnown RBP8.9□□□□□ -0.98
LIG1-211ENST00000596457 SLC25A48Q6ZT89 311 aaKnown RBP8.9□□□□□ -0.98
LIG1-211ENST00000596457 CLVS1Q8IUQ0 354 aaPredicted RBP8.9□□□□□ -0.98
LIG1-211ENST00000596457 ZNF439Q8NDP4 499 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 OR2AK2Q8NG84 335 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 OR56B4Q8NH76 319 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 SLC25A38Q96DW6 304 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 YPEL2Q96QA6 119 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 ABHD14AQ9BUJ0 271 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 ST6GALNAC5Q9BVH7 336 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 DIABLOQ9NR28 239 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 COMMD3Q9UBI1 195 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 SIGLEC9Q9Y336 463 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 RNF114Q9Y508 228 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 IGHV1-3A0A0C4DH29 117 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 A0A1W2PPI3 338 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 CLPSL1A2RUU4 121 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 POM121CA8CG34 1229 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 SERPINE3A8MV23 424 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 SCGNO76038 276 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 LPLP06858 475 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 ZBTB25P24278 435 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 ARL6IP1Q15041 203 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 ZNF260Q3ZCT1 412 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 Q3ZCU0 254 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 FBLN7Q53RD9 439 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 LIAT1Q6ZQX7 453 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 TGIF2LXQ8IUE1 241 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 SAMD12Q8N8I0 201 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 C8orf31Q8N9H6 132 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 OR4C13Q8NGP0 309 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 LINC01006Q8NI28 216 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 NUDCD2Q8WVJ2 157 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 SLC25A46Q96AG3 418 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 RBMXL1Q96E39 390 aaKnown RBP8.89□□□□□ -0.99
LIG1-211ENST00000596457 S100A16Q96FQ6 103 aaKnown RBP8.89□□□□□ -0.99
LIG1-211ENST00000596457 SLC25A33Q9BSK2 321 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 NPFFR1Q9GZQ6 430 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 DCSTAMPQ9H295 470 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 RNF150Q9ULK6 438 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 NBEAL2Q6ZNJ1 2754 aa8.89□□□□□ -0.99
LIG1-211ENST00000596457 A0A1B0GUS0 222 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 SH2D7A6NKC9 451 aaPredicted RBP8.88□□□□□ -0.99
LIG1-211ENST00000596457 FABP7O15540 132 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 GABARAPO95166 117 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 IGKV1D-33P01593 117 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 IGKV1-33P01594 117 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 FCER2P06734 321 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 GSTP1P09211 210 aaKnown RBP8.88□□□□□ -0.99
LIG1-211ENST00000596457 FAM106CPP0CH98 169 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 PTHLHP12272 177 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 TMEM11P17152 192 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 OR3A3P47888 321 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 RORCP51449 518 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 SCAND1P57086 179 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 SRSF4Q08170 494 aaKnown RBP8.88□□□□□ -0.99
LIG1-211ENST00000596457 ZNF816Q0VGE8 651 aaPredicted RBP8.88□□□□□ -0.99
LIG1-211ENST00000596457 HABP2Q14520 560 aaPredicted RBP8.88□□□□□ -0.99
LIG1-211ENST00000596457 CTF1Q16619 201 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 IGSF11Q5DX21 431 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 C9orf152Q5JTZ5 239 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 UBE2NLQ5JXB2 153 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 HACD4Q5VWC8 232 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 STEAP3Q658P3 488 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 SHISA2Q6UWI4 295 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 OR8H3Q8N146 312 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 OR4A4PQ8NGN8 299 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 RTN4IP1Q8WWV3 396 aaPredicted RBP8.88□□□□□ -0.99
LIG1-211ENST00000596457 ABHD14BQ96IU4 210 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 ZNF747Q9BV97 191 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 PARP12Q9H0J9 701 aaKnown RBP8.88□□□□□ -0.99
LIG1-211ENST00000596457 SCOCQ9UIL1 159 aa8.88□□□□□ -0.99
LIG1-211ENST00000596457 IGKV1D-8A0A087WSZ0 117 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 IGKV1-6A0A0C4DH72 117 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 MEIS3P1A6NDR6 274 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 FAM25AB3EWG3 89 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 FAM25CB3EWG5 89 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 FAM25GB3EWG6 89 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 ZNF736B4DX44 427 aaPredicted RBP8.87□□□□□ -0.99
LIG1-211ENST00000596457 J3QRK9 145 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 NOL3O60936 208 aaKnown RBP8.87□□□□□ -0.99
LIG1-211ENST00000596457 TMEM127O75204 238 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 TSPAN9O75954 239 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 VSIG10L2P0DP72 767 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 KIR2DS4P43632 304 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 RPL5P46777 297 aaKnown RBP8.87□□□□□ -0.99
LIG1-211ENST00000596457 BLCAPP62952 87 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 KIR2DS1Q14954 304 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 PNLIPRP3Q17RR3 467 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 OR10J5Q8NHC4 309 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 OR2T6Q8NHC8 308 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 CFHR4Q92496 578 aa8.87□□□□□ -0.99
LIG1-211ENST00000596457 ST6GALNAC6Q969X2 333 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms