RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 RBM14Q96PK6 669 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 FUNDC2Q9BWH2 189 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 KCNK7Q9Y2U2 307 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 IGHV1-3A0A0C4DH29 117 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 A0A1W2PPI3 338 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 SLC31A2O15432 143 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 HSPA12AO43301 675 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 PITPNAQ00169 270 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 DIAPH2-AS1Q14236 149 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 HES1Q14469 280 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 GNMTQ14749 295 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 ARSJQ5FYB0 599 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 LYG1Q8N1E2 194 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 OR4A4PQ8NGN8 299 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 OR56B4Q8NH76 319 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 SGMS2Q8NHU3 365 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 RTN4IP1Q8WWV3 396 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 WFDC12Q8WWY7 111 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 EDARADDQ8WWZ3 215 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 ST6GALNAC6Q969X2 333 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 SLC25A33Q9BSK2 321 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 RHBDL2Q9NX52 303 aa13.85□□□□□ -0.19
SHKBP1-212ENST00000596163 A0A0A6YYH2 397 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 A6NJ64 397 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 ITGB1BP1O14713 200 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 LANCL1O43813 399 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 SNRNP70P08621 437 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 GSTP1P09211 210 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 SMIM18P0DKX4 95 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 CD1BP29016 333 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 RPS19P39019 145 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 CEACAM6P40199 344 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 REG1BP48304 166 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 SERPINB10P48595 397 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 PROK1P58294 105 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 SRSF7Q16629 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 C5orf24Q7Z6I8 188 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 CFHR4Q92496 578 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 DIABLOQ9NR28 239 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 PIPOXQ9P0Z9 390 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 SLC23A1Q9UHI7 598 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 SPATA2Q9UM82 520 aa13.84□□□□□ -0.19
SHKBP1-212ENST00000596163 FABP7O15540 132 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 PEX14O75381 377 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 FCGR3AP08637 254 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 SCTP09683 121 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 TMEM11P17152 192 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 DTYMKP23919 212 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 HABP2Q14520 560 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 PNLIPRP3Q17RR3 467 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 HACD4Q5VWC8 232 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 Q6ZPA2 131 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 Q8N2B8 174 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 OR2T10Q8NGZ9 312 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 ZNF702PQ9H963 129 aa13.83□□□□□ -0.2
SHKBP1-212ENST00000596163 DIRAS3O95661 229 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 IGKV1D-33P01593 117 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 IGKV1-33P01594 117 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 TGFBR1P36897 503 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 EBI3Q14213 229 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 GPR141Q7Z602 305 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 ANKRD13BQ86YJ7 626 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 IZUMO1Q8IYV9 350 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 OR5H6Q8NGV6 325 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 KCTD12Q96CX2 325 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 S1PR3Q99500 378 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 DCSTAMPQ9H295 470 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 MOB4Q9Y3A3 225 aa13.82□□□□□ -0.2
SHKBP1-212ENST00000596163 ANK2Q01484 3957 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 RAB29O14966 203 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 GNG2P59768 71 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 VBP1P61758 197 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 BLCAPP62952 87 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 FAM71F2Q6NXP2 309 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 Q6ZS49 121 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 OR10J5Q8NHC4 309 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 SLC25A46Q96AG3 418 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 S100A16Q96FQ6 103 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 CITED1Q99966 193 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 SIGLEC9Q9Y336 463 aa13.81□□□□□ -0.2
SHKBP1-212ENST00000596163 TRAV18A0A075B6X5 111 aa13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 FGF16O43320 207 aa13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 MOSP00540 346 aa13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 VDAC2P45880 294 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 NCS1P62166 190 aa13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 HNF4GQ14541 408 aa13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 ZNF260Q3ZCT1 412 aa13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 OR8H1Q8NGG4 311 aa13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 C11orf54Q9H0W9 315 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 OR1A1Q9P1Q5 309 aa13.8□□□□□ -0.2
SHKBP1-212ENST00000596163 IGHV3-72A0A0B4J1Y9 119 aa13.79□□□□□ -0.2
SHKBP1-212ENST00000596163 BET1O15155 118 aa13.79□□□□□ -0.2
SHKBP1-212ENST00000596163 ST8SIA5O15466 376 aa13.79□□□□□ -0.2
SHKBP1-212ENST00000596163 CTXN2P0C2S0 81 aa13.79□□□□□ -0.2
SHKBP1-212ENST00000596163 GSTT2P0CG29 244 aa13.79□□□□□ -0.2
SHKBP1-212ENST00000596163 GSTT2BP0CG30 244 aa13.79□□□□□ -0.2
SHKBP1-212ENST00000596163 ALDH3B2P48448 385 aa13.79□□□□□ -0.2
SHKBP1-212ENST00000596163 HERPUD1Q15011 391 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms