RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 IDNKQ5T6J7 187 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 MOB3BQ86TA1 216 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 THNSL2Q86YJ6 484 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 OR4C13Q8NGP0 309 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 IL1F10Q8WWZ1 152 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 MAFIPQ8WZ33 124 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 GALMQ96C23 342 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 SLC25A38Q96DW6 304 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 YPEL2Q96QA6 119 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 SLC25A33Q9BSK2 321 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 FUNDC2Q9BWH2 189 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 NAA50Q9GZZ1 169 aaKnown RBP8.89□□□□□ -0.99
VRK3-210ENST00000596121 IFI27L2Q9H2X8 130 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 RANBP3Q9H6Z4 567 aaPredicted RBP8.89□□□□□ -0.99
VRK3-210ENST00000596121 RAB18Q9NP72 206 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 C12orf4Q9NQ89 552 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 ZNF230Q9UIE0 474 aaPredicted RBP8.89□□□□□ -0.99
VRK3-210ENST00000596121 PITPNC1Q9UKF7 332 aa8.89□□□□□ -0.99
VRK3-210ENST00000596121 WNK1Q9H4A3 2382 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 ST8SIA5O15466 376 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 IGKV1D-33P01593 117 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 IGKV1-33P01594 117 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 GAPDHP04406 335 aaKnown RBP8.88□□□□□ -0.99
VRK3-210ENST00000596121 FCGR3AP08637 254 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 CD3GP09693 182 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 NCS1P62166 190 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 EBI3Q14213 229 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 CDNFQ49AH0 187 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 LY6G6FQ5SQ64 297 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 STEAP3Q658P3 488 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 CCDC144NLQ6NUI1 221 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 MOB1BQ7L9L4 216 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 OR8H3Q8N146 312 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 LYG1Q8N1E2 194 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 Q8N6K4 173 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 WIPF2Q8TF74 440 aaPredicted RBP8.88□□□□□ -0.99
VRK3-210ENST00000596121 RITA1Q96K30 269 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 ZNF251Q9BRH9 671 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 AGMATQ9BSE5 352 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 ABHD14AQ9BUJ0 271 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 VCX3AQ9NNX9 186 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 RAB9BQ9NP90 201 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 ABRACLQ9P1F3 81 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 CMYA5Q8N3K9 4069 aa8.88□□□□□ -0.99
VRK3-210ENST00000596121 METTL21EPA6NDL7 271 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 TRDCB7Z8K6 153 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 LANCL1O43813 399 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 SSX5O60225 188 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 PROP1O75360 226 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 GSTT2P0CG29 244 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 GSTT2BP0CG30 244 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 FAM106CPP0CH98 169 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 CEACAM6P40199 344 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 RANBP1P43487 201 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 VBP1P61758 197 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 TIMM50Q3ZCQ8 353 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 ZNF260Q3ZCT1 412 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 IGSF11Q5DX21 431 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 ZNF833PQ6ZTB9 187 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 IZUMO1Q8IYV9 350 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 KLHDC1Q8N7A1 406 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 OR2T6Q8NHC8 308 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 EAF1Q96JC9 268 aaPredicted RBP8.87□□□□□ -0.99
VRK3-210ENST00000596121 WNT10AQ9GZT5 417 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 C11orf54Q9H0W9 315 aaPredicted RBP8.87□□□□□ -0.99
VRK3-210ENST00000596121 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.87□□□□□ -0.99
VRK3-210ENST00000596121 PLSCR3Q9NRY6 295 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 RHBDL2Q9NX52 303 aa8.87□□□□□ -0.99
VRK3-210ENST00000596121 SAA2-SAA4A0A096LPE2 208 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 SERPINE3A8MV23 424 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 TFAP2AP05549 437 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 SAA2P0DJI9 122 aaPredicted RBP8.86□□□□□ -0.99
VRK3-210ENST00000596121 TMEM11P17152 192 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 ALDH3B2P48448 385 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 ARHGDIBP52566 201 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 LINC00205P59089 165 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 CTF1Q16619 201 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 ABCA11PQ4W5N1 156 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 RPL39P5Q59GN2 51 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 HACD4Q5VWC8 232 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 C11orf88Q6PI97 169 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 C16orf82Q7Z2V1 217 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 TGIF2LXQ8IUE1 241 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 C11orf44Q8N8P7 122 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 DTX3Q8N9I9 347 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 NUDCD2Q8WVJ2 157 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 ABHD14BQ96IU4 210 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 NABP2Q9BQ15 211 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 MRPL20Q9BYC9 149 aaKnown RBP8.86□□□□□ -0.99
VRK3-210ENST00000596121 PRSS22Q9GZN4 317 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 SLC23A1Q9UHI7 598 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 RNF150Q9ULK6 438 aa8.86□□□□□ -0.99
VRK3-210ENST00000596121 TRAV18A0A075B6X5 111 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 TMEM235A6NFC5 223 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 LINC01548A6NM66 108 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 FABP7O15540 132 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 RGS11O94810 467 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 LPLP06858 475 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 CT45A6P0DMU7 189 aa8.85□□□□□ -0.99
VRK3-210ENST00000596121 CT45A5P0DMU8 189 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms