RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 SUMO3P55854 103 aaPredicted RBP12.21□□□□□ -0.45
CIRBP-242ENST00000593093 ZNF726P1Q15940 193 aa12.21□□□□□ -0.45
CIRBP-242ENST00000593093 TCF23Q7RTU1 214 aa12.21□□□□□ -0.45
CIRBP-242ENST00000593093 OR51G1Q8NGK1 321 aa12.21□□□□□ -0.45
CIRBP-242ENST00000593093 FGFBP3Q8TAT2 258 aa12.21□□□□□ -0.45
CIRBP-242ENST00000593093 PARLQ9H300 379 aa12.21□□□□□ -0.45
CIRBP-242ENST00000593093 TPRP12270 2363 aaKnown RBP12.21□□□□□ -0.45
CIRBP-242ENST00000593093 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.46
CIRBP-242ENST00000593093 PGLYRP1O75594 196 aaPredicted RBP12.21□□□□□ -0.46
CIRBP-242ENST00000593093 FUT6P51993 359 aa12.21□□□□□ -0.46
CIRBP-242ENST00000593093 CD81P60033 236 aa12.21□□□□□ -0.46
CIRBP-242ENST00000593093 DCAF10Q5QP82 559 aa12.21□□□□□ -0.46
CIRBP-242ENST00000593093 MKXQ8IYA7 352 aa12.21□□□□□ -0.46
CIRBP-242ENST00000593093 LRTM2Q8N967 370 aa12.21□□□□□ -0.46
CIRBP-242ENST00000593093 SAMD10Q9BYL1 202 aa12.21□□□□□ -0.46
CIRBP-242ENST00000593093 LPAR2Q9HBW0 351 aa12.21□□□□□ -0.46
CIRBP-242ENST00000593093 C1QTNF9BB2RNN3 333 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 NXPH2O95156 264 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 MAS1LP35410 378 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 TNFSF10P50591 281 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 MEF2BQ02080 365 aaPredicted RBP12.2□□□□□ -0.46
CIRBP-242ENST00000593093 EXT1Q16394 746 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 Q6ZPA2 131 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 OR2V1Q8NHB1 315 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 SSC4DQ8WTU2 575 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 CISD1Q9NZ45 108 aaKnown RBP12.2□□□□□ -0.46
CIRBP-242ENST00000593093 A0A0J9YW62 118 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 LMO7DNF2Z398 122 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 CCL3P10147 92 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 ZNF816Q0VGE8 651 aaPredicted RBP12.2□□□□□ -0.46
CIRBP-242ENST00000593093 SLC23A3Q6PIS1 610 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 MRPL21Q7Z2W9 205 aaKnown RBP12.2□□□□□ -0.46
CIRBP-242ENST00000593093 MRGPRGQ86SM5 289 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 USF3Q68DE3 2245 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 NBEAQ8NFP9 2946 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 A0A1B0GW64 132 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 CEACAM1P13688 526 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 LMO1P25800 156 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 ERVFC1-1P60608 527 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 RPL23P62829 140 aaKnown RBP12.2□□□□□ -0.46
CIRBP-242ENST00000593093 PSG4Q00888 419 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 ID3Q02535 119 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 SLC38A11Q08AI6 406 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.2□□□□□ -0.46
CIRBP-242ENST00000593093 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
CIRBP-242ENST00000593093 SIGLEC12Q96PQ1 595 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 TAAR3PQ9P1P4 343 aa12.2□□□□□ -0.46
CIRBP-242ENST00000593093 NPIPB13A6NJU9 1138 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 NPIPB4C9JG80 1138 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 GYPAP02724 150 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 THBS3P49746 956 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 PAX9P55771 341 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 RBX1P62877 108 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 LTC4SQ16873 150 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 LEMD1Q68G75 181 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 OR1A1Q9P1Q5 309 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 FER1L5A0AVI2 2057 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 FREM1Q5H8C1 2179 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 C5orf49A4QMS7 147 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 KIAA1324LA8MWY0 1029 aaPredicted RBP12.19□□□□□ -0.46
CIRBP-242ENST00000593093 IL18BPO95998 194 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 F2RP25116 425 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 SPATA46Q5T0L3 261 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 VN1R17PQ8TDU5 208 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 IMMP2LQ96T52 175 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 RARRES3Q9UL19 164 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 SIRPB1O00241 398 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 CCR5P51681 352 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 FFAR4Q5NUL3 377 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 TMEM211Q6ICI0 200 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 DPPA3Q6W0C5 159 aa12.19□□□□□ -0.46
CIRBP-242ENST00000593093 SYNGR1O43759 233 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 ODF3L1Q8IXM7 274 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 OR10G4Q8NGN3 311 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 CLN8Q9UBY8 286 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 TRAPPC2LQ9UL33 140 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 TRBV24-1A0A075B6N3 115 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 CNN1P51911 297 aaKnown RBP12.18□□□□□ -0.46
CIRBP-242ENST00000593093 KCNIP4Q6PIL6 250 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 BAGE3Q86Y29 109 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 BAGE2Q86Y30 109 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 NABP1Q96AH0 204 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 FOXB1Q99853 325 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 TWSG1Q9GZX9 223 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 ZDHHC11Q9H8X9 412 aa12.18□□□□□ -0.46
CIRBP-242ENST00000593093 RAB35Q15286 201 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 DECR2Q9NUI1 292 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 MUC22E2RYF6 1773 aaPredicted RBP12.17□□□□□ -0.46
CIRBP-242ENST00000593093 RPL36A-HNRNPH2H7BZ11 118 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 MPLP40238 635 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 KRTDAPP60985 99 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 NMSQ5H8A3 153 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 Q6ZVH6 145 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 ERASQ7Z444 233 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 RPP25LQ8N5L8 163 aaKnown RBP12.17□□□□□ -0.46
CIRBP-242ENST00000593093 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 RAB40CQ96S21 281 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 SRXN1Q9BYN0 137 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms