RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
DDX39A-221ENST00000593026 Q6ZS49 121 aa12.06□□□□□ -0.48
DDX39A-221ENST00000593026 OR2AK2Q8NG84 335 aa12.06□□□□□ -0.48
DDX39A-221ENST00000593026 CT45A3Q8NHU0 189 aa12.06□□□□□ -0.48
DDX39A-221ENST00000593026 ABHD14AQ9BUJ0 271 aa12.06□□□□□ -0.48
DDX39A-221ENST00000593026 CHIAQ9BZP6 476 aa12.06□□□□□ -0.48
DDX39A-221ENST00000593026 ABCB10Q9NRK6 738 aa12.06□□□□□ -0.48
DDX39A-221ENST00000593026 OR1A1Q9P1Q5 309 aa12.06□□□□□ -0.48
DDX39A-221ENST00000593026 IGKV1-6A0A0C4DH72 117 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 HSD17B6O14756 317 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 BET1O15155 118 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 GSTT2P0CG29 244 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 GSTT2BP0CG30 244 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 CBX5P45973 191 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 ZNF134P52741 427 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 HERPUD1Q15011 391 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 KRTAP24-1Q3LI83 254 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 IGSF11Q5DX21 431 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 LY6G6FQ5SQ64 297 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 FAM216AQ8WUB2 273 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 TMEM158Q8WZ71 300 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 CABLES2Q9BTV7 478 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 SLIRPQ9GZT3 109 aaKnown RBP12.05□□□□□ -0.48
DDX39A-221ENST00000593026 NDUFA13Q9P0J0 144 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 VPREB3Q9UKI3 123 aa12.05□□□□□ -0.48
DDX39A-221ENST00000593026 MRPS7Q9Y2R9 242 aaKnown RBP12.05□□□□□ -0.48
DDX39A-221ENST00000593026 IGKV1D-8A0A087WSZ0 117 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 CTDSP2O14595 271 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 DIRAS3O95661 229 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 BRS3P32247 399 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 CEACAM6P40199 344 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 RAB7AP51149 207 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 RAB13P51153 203 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 DYNLT3P51808 116 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 C16orf87Q6PH81 154 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 LAX1Q8IWV1 398 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 LYG1Q8N1E2 194 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 OR10J5Q8NHC4 309 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 SPATA3Q8NHX4 192 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 EDARADDQ8WWZ3 215 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 MDFIQ99750 246 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 DCUN1D5Q9BTE7 237 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 C6orf62Q9GZU0 229 aaPredicted RBP12.04□□□□□ -0.48
DDX39A-221ENST00000593026 MIXL1Q9H2W2 232 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 EXTL2Q9UBQ6 330 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 ADAM30Q9UKF2 790 aa12.04□□□□□ -0.48
DDX39A-221ENST00000593026 TRBV6-7A0A0A0MS04 114 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 GPR137BO60478 399 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 GAPDHP04406 335 aaKnown RBP12.03□□□□□ -0.48
DDX39A-221ENST00000593026 LPLP06858 475 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 PRSS3P35030 304 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 REG1BP48304 166 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 DIAPH2-AS1Q14236 149 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 LY6EQ16553 131 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 HOGA1Q86XE5 327 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 SNX29P2Q8IUI4 249 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 GVQW1Q8N7I0 195 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-221ENST00000593026 BEST4Q8NFU0 473 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 MCFD2Q8NI22 146 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 PIFOQ8TCI5 191 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 GCDHQ92947 438 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-221ENST00000593026 GINS4Q9BRT9 223 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
DDX39A-221ENST00000593026 IFT46Q9NQC8 304 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
DDX39A-221ENST00000593026 A0A1W2PPI3 338 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 DPPA5A6NC42 116 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 ITGB1BP1O14713 200 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 TIMM23O14925 209 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 ST8SIA5O15466 376 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 HLA-DQB1P01920 261 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 CTXN2P0C2S0 81 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 ZNF137PP52743 207 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 ARPC4P59998 168 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 ACTG1P63261 375 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 ZNF816Q0VGE8 651 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-221ENST00000593026 CNIH2Q6PI25 160 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 OR8H3Q8N146 312 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-221ENST00000593026 ST6GALNAC6Q969X2 333 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 DGCR14Q96DF8 476 aaKnown RBP12.02□□□□□ -0.49
DDX39A-221ENST00000593026 C11orf54Q9H0W9 315 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-221ENST00000593026 IFI27L2Q9H2X8 130 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 RDH8Q9NYR8 311 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 PITPNC1Q9UKF7 332 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 TCF19Q9Y242 345 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 ATRQ13535 2644 aa12.02□□□□□ -0.49
DDX39A-221ENST00000593026 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 FAM181BA6NEQ2 426 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 TXNL1O43396 289 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 LANCL1O43813 399 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 CRYBA1P05813 215 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 FCER2P06734 321 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 RPL15P61313 204 aaKnown RBP12.01□□□□□ -0.49
DDX39A-221ENST00000593026 LIAT1Q6ZQX7 453 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 TGIF2LXQ8IUE1 241 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 C19orf24Q9BVV8 132 aa12.01□□□□□ -0.49
DDX39A-221ENST00000593026 TOLLIPQ9H0E2 274 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms