RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ODF3L1Q8IXM7 274 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 CHPT1Q8WUD6 406 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 GALMQ96C23 342 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 YPEL2Q96QA6 119 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 YTHDF1Q9BYJ9 559 aaKnown RBP10.96□□□□□ -0.65
APOC1-208ENST00000592535 CHMP1AQ9HD42 196 aaPredicted RBP10.96□□□□□ -0.65
APOC1-208ENST00000592535 PLSCR3Q9NRY6 295 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 LIN7CQ9NUP9 197 aaKnown RBP10.96□□□□□ -0.65
APOC1-208ENST00000592535 PLEKHJ1Q9NW61 149 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 PF4P02776 101 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 CD33P20138 364 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 GPR12P47775 334 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 F2RL1P55085 397 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 LSAMPQ13449 338 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 FOXRED2Q8IWF2 684 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 STPG2Q8N412 459 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 FAM89BQ8N5H3 189 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 OR51D1Q8NGF3 324 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 SETD6Q8TBK2 473 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 S1PR3Q99500 378 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 HDHD3Q9BSH5 251 aaPredicted RBP10.95□□□□□ -0.66
APOC1-208ENST00000592535 URM1Q9BTM9 101 aaKnown RBP10.95□□□□□ -0.66
APOC1-208ENST00000592535 ABCG5Q9H222 651 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 ACOT13Q9NPJ3 140 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 ABRACLQ9P1F3 81 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 AK3Q9UIJ7 227 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 BLOC1S6Q9UL45 172 aa10.95□□□□□ -0.66
APOC1-208ENST00000592535 PRKDCP78527 4128 aaKnown RBP10.94□□□□□ -0.66
APOC1-208ENST00000592535 FOXI3A8MTJ6 420 aaPredicted RBP10.94□□□□□ -0.66
APOC1-208ENST00000592535 RGS11O94810 467 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 IGLL1P15814 213 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 OR3A3P47888 321 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 LY6G6FQ5SQ64 297 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 WFDC9Q8NEX5 89 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 OR8H1Q8NGG4 311 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 IL1F10Q8WWZ1 152 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 PHF21AQ96BD5 680 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 FAM3DQ96BQ1 224 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 RASL11BQ9BPW5 248 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 NABP2Q9BQ15 211 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 MRPL20Q9BYC9 149 aaKnown RBP10.94□□□□□ -0.66
APOC1-208ENST00000592535 V9GY05 133 aa10.94□□□□□ -0.66
APOC1-208ENST00000592535 SHISA3A0PJX4 238 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 AP4M1O00189 453 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 VEGFCP49767 419 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 TMEM50BP56557 158 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 RPL23AP62750 156 aaKnown RBP10.93□□□□□ -0.66
APOC1-208ENST00000592535 SLC35B1P78383 322 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 PLA2G7Q13093 441 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 C2orf76Q3KRA6 126 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 HES5Q5TA89 166 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 ZNF833PQ6ZTB9 187 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 C18orf65Q6ZTR6 163 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 MOB1BQ7L9L4 216 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 FAM71E2Q8N5Q1 922 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 OR2AK2Q8NG84 335 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 HSPB9Q9BQS6 159 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 PARP12Q9H0J9 701 aaKnown RBP10.93□□□□□ -0.66
APOC1-208ENST00000592535 IFI27L2Q9H2X8 130 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 HSF4Q9ULV5 492 aa10.93□□□□□ -0.66
APOC1-208ENST00000592535 SAA2-SAA4A0A096LPE2 208 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 TRBV6-6A0A0A6YYG2 114 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 TMEM272A0A1B0GTI8 110 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 LDLRAD4O15165 306 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 SAA2P0DJI9 122 aaPredicted RBP10.92□□□□□ -0.66
APOC1-208ENST00000592535 OR10A3P58181 314 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 GABARAPL2P60520 117 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 HLA-DRB3P79483 266 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 MMDQ15546 238 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 ETV3LQ6ZN32 361 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 COMMD1Q8N668 190 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 ARHGAP5-AS1Q96IT6 56 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 RITA1Q96K30 269 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 PECRQ9BY49 303 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 RIMS4Q9H426 269 aaPredicted RBP10.92□□□□□ -0.66
APOC1-208ENST00000592535 NDUFB11Q9NX14 153 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 STEAP1Q9UHE8 339 aa10.92□□□□□ -0.66
APOC1-208ENST00000592535 TGP01266 2768 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 TRAV1-2A0A0B4J238 106 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 SLC2A2P11168 524 aaPredicted RBP10.91□□□□□ -0.66
APOC1-208ENST00000592535 CNTFRP26992 372 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 SOX6P35712 828 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 PSMD7P51665 324 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 ACTBP60709 375 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 PLAC9Q5JTB6 97 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 FOXB2Q5VYV0 432 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 CD200R1LQ6Q8B3 271 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 C8orf86Q6ZUL3 223 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 LINC00482Q8N8I6 264 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 CMSS1Q9BQ75 279 aaKnown RBP10.91□□□□□ -0.66
APOC1-208ENST00000592535 ZNF251Q9BRH9 671 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 Q9N2K0 584 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 C12orf4Q9NQ89 552 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 ZFP57Q9NU63 452 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 NECAP2Q9NVZ3 263 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 OR1A1Q9P1Q5 309 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 SLC23A1Q9UHI7 598 aa10.91□□□□□ -0.66
APOC1-208ENST00000592535 TRDV1A0A1B0GX56 115 aa10.9□□□□□ -0.66
APOC1-208ENST00000592535 TRIM64CA6NLI5 447 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms