RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	TAF9B	Q9HBM6	251 aa		14.06	□□□□□ -0.16
CIRBP-238	ENST00000592412	SPACA1	Q9HBV2	294 aa		14.06	□□□□□ -0.16
CIRBP-238	ENST00000592412	OR2S2	Q9NQN1	319 aa		14.06	□□□□□ -0.16
CIRBP-238	ENST00000592412	MBNL3	Q9NUK0	354 aa	Known RBP	14.06	□□□□□ -0.16
CIRBP-238	ENST00000592412	C19orf73	Q9NVV2	129 aa		14.06	□□□□□ -0.16
CIRBP-238	ENST00000592412	ORC6	Q9Y5N6	252 aa		14.06	□□□□□ -0.16
CIRBP-238	ENST00000592412	GMPPB	Q9Y5P6	360 aa		14.06	□□□□□ -0.16
CIRBP-238	ENST00000592412	TRAV8-7	A0A075B6U6	113 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412		A0A1W2PN81	502 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	MCRIP1	C9JLW8	97 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	LALBA	P00709	142 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	EGR2	P11161	476 aa	Predicted RBP	14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	CHRNA7	P36544	502 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	RIPK1	Q13546	671 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	CCDC58	Q4VC31	144 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	SIGIRR	Q6IA17	410 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	LIN54	Q6MZP7	749 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	ZNF833P	Q6ZTB9	187 aa		14.05	□□□□□ -0.16
CIRBP-238	ENST00000592412	TRBV5-5	A0A0J9YX44	114 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	ANKRD65	E5RJM6	399 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	LDLRAD4	O15165	306 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	GPX5	O75715	221 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	OR8U9	P0C7N5	309 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	SNRPB	P14678	240 aa	Known RBP	14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	ETV1	P50549	477 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	LRRC36	Q1X8D7	754 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	OR2G6	Q5TZ20	316 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	CBR4	Q8N4T8	237 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	MUL1	Q969V5	352 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	C9orf16	Q9BUW7	83 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	RAB9B	Q9NP90	201 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	CHCHD3	Q9NX63	227 aa	Known RBP	14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	FOXA2	Q9Y261	457 aa	Predicted RBP	14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	PEX16	Q9Y5Y5	336 aa		14.04	□□□□□ -0.16
CIRBP-238	ENST00000592412	SAA2-SAA4	A0A096LPE2	208 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412		A8MZ25	164 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	FCN1	O00602	326 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	IGHV3-11	P01762	117 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	SAA2	P0DJI9	122 aa	Predicted RBP	14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	RPS11	P62280	158 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	CX3CL1	P78423	397 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	DOC2B	Q14184	412 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	TRAT1	Q6PIZ9	186 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	GLIPR1L1	Q6UWM5	242 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	LYPD6	Q86Y78	171 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	MRPL30	Q8TCC3	161 aa	Known RBP	14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	ISOC1	Q96CN7	298 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	SMIM19	Q96E16	107 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412		Q96MT0	163 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	GHITM	Q9H3K2	345 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	FBXL15	Q9H469	300 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	BANF2	Q9H503	90 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	FGF20	Q9NP95	211 aa	Predicted RBP	14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	JPT1	Q9UK76	154 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	GAB2	Q9UQC2	676 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	MRPS28	Q9Y2Q9	187 aa	Known RBP	14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	NUBP2	Q9Y5Y2	271 aa		14.03	□□□□□ -0.16
CIRBP-238	ENST00000592412	UBE2QL1	A1L167	161 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	OGG1	O15527	345 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	IGLV1-51	P01701	117 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	VEGFC	P49767	419 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	GPR176	Q14439	515 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	SMN1	Q16637	294 aa	Known RBP	14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	C6orf141	Q5SZD1	244 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	ZNF660	Q6AZW8	331 aa	Predicted RBP	14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	MRPS24	Q96EL2	167 aa	Known RBP	14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	RDH12	Q96NR8	316 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	CST11	Q9H112	138 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	IFI27L2	Q9H2X8	130 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	RPL36	Q9Y3U8	105 aa	Known RBP	14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	A3GALT2	U3KPV4	340 aa		14.02	□□□□□ -0.17
CIRBP-238	ENST00000592412	YPEL1	O60688	119 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	CA11	O75493	328 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	HTD2	P86397	168 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	PITPNA	Q00169	270 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	CD200R1L	Q6Q8B3	271 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	FAM131A	Q6UXB0	335 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	ZNF554	Q86TJ5	538 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412		Q96M66	194 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	YPEL2	Q96QA6	119 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	SELENOI	Q9C0D9	397 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	KIAA1456	Q9P272	454 aa		14.01	□□□□□ -0.17
CIRBP-238	ENST00000592412	FRAS1	Q86XX4	4008 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	ERICH4	A6NGS2	130 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	FAM90A7P	A6NKC0	464 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	FAM90A23P	A8MXZ1	464 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	RRH	O14718	337 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	HSPA12A	O43301	675 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	WBP4	O75554	376 aa	Known RBP	14	□□□□□ -0.17
CIRBP-238	ENST00000592412	MAS1	P04201	325 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	HSPB1	P04792	205 aa	Known RBP	14	□□□□□ -0.17
CIRBP-238	ENST00000592412	MGMT	P16455	207 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	FST	P19883	344 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	FUT3	P21217	361 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	LY6G6F	Q5SQ64	297 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	DMKN	Q6E0U4	476 aa	Predicted RBP	14	□□□□□ -0.17
CIRBP-238	ENST00000592412	TCTEX1D1	Q8N7M0	179 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	GHSR	Q92847	366 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	RHOV	Q96L33	236 aa		14	□□□□□ -0.17
CIRBP-238	ENST00000592412	PGLYRP3	Q96LB9	341 aa		14	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms