RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 LINC00310P59036 64 aa10.52□□□□□ -0.72
SMARCA4-217ENST00000591595 ADAT3Q96EY9 351 aaPredicted RBP10.52□□□□□ -0.72
SMARCA4-217ENST00000591595 TAAR6Q96RI8 345 aa10.52□□□□□ -0.72
SMARCA4-217ENST00000591595 FOXQ1Q9C009 403 aa10.52□□□□□ -0.72
SMARCA4-217ENST00000591595 BANF2Q9H503 90 aa10.52□□□□□ -0.72
SMARCA4-217ENST00000591595 C1orf123Q9NWV4 160 aa10.52□□□□□ -0.72
SMARCA4-217ENST00000591595 THYN1Q9P016 225 aa10.52□□□□□ -0.72
SMARCA4-217ENST00000591595 PXMP4Q9Y6I8 212 aa10.52□□□□□ -0.72
SMARCA4-217ENST00000591595 KLRC4-KLRK1H3BQV0 150 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 IGKV3-11P04433 115 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 RBMXP38159 391 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 DLX2Q07687 328 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 UNC119Q13432 240 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 PHYHD1Q5SRE7 291 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 C1orf100Q5SVJ3 147 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 FAM103A1Q9BTL3 118 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 SSBP4Q9BWG4 385 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 CISD1Q9NZ45 108 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 TP53TG3Q9ULZ0 132 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 RHBDD3Q9Y3P4 386 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 CABIN1Q9Y6J0 2220 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 UNC13CQ8NB66 2214 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 NSG1A0A0A6YYJ2 146 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 IGKV1D-43A0A0B4J1Z2 117 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 BCL2P10415 239 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 DAP3P51398 398 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 Q7L0L9 218 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 SIGLECL1Q8N7X8 197 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 OR51E1Q8TCB6 317 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 SCGB3A2Q96PL1 93 aa10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 GEMIN7Q9H840 131 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-217ENST00000591595 A0A1B0GW15 77 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 FIGNL2A6NMB9 653 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 FBLP22087 321 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 IL3RAP26951 378 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 TIMP3P35625 211 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 KCNIP4Q6PIL6 250 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 GLIPR1L1Q6UWM5 242 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 CENPVQ7Z7K6 275 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 ZIC4Q8N9L1 334 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 OR2I1PQ8NGU4 316 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 DERL1Q9BUN8 251 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 NKX2-4Q9H2Z4 354 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 KLHL13Q9P2N7 655 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 SS18L2Q9UHA2 77 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 TRAV8-6A0A0B4J262 113 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 NKX2-6A6NCS4 301 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 EPOPA6NHQ4 379 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 SHISA8B8ZZ34 492 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 KITLGP21583 273 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 LCN2P80188 198 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 ZNF266Q14584 549 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 HLA-BQ31612 363 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 CARD17Q5XLA6 110 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 WDYHV1Q96HA8 205 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 WNT10AQ9GZT5 417 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 PBOV1Q9GZY1 135 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 CLEC1BQ9P126 229 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 SPAARA0A1B0GVQ0 90 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 WIPF3A6NGB9 483 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 GAGE10A6NGK3 116 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 SRP14P37108 136 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 PMP22Q01453 160 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 MPV17L2Q567V2 206 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 TCTEX1D4Q5JR98 221 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 Q6ZS52 159 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 CYP2G1PQ6ZSU1 146 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 H1FNTQ75WM6 255 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 DEFB125Q8N687 156 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 ST6GALNAC5Q9BVH7 336 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 PHF7Q9BWX1 381 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 MED12Q93074 2177 aa10.51□□□□□ -0.73
SMARCA4-217ENST00000591595 A0A0U1RQK1 487 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 CEACAM18A8MTB9 384 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 TTRP02766 147 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 ISG15P05161 165 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 EN2P19622 333 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 AMY2BP19961 511 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 ADMP35318 185 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 TMEM249Q2WGJ8 235 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 KIAA1644Q3SXP7 199 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 CCDC144NLQ6NUI1 221 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 DPF1Q92782 380 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 SDCBPO00560 298 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 WASHC3Q9Y3C0 194 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 WDR87Q6ZQQ6 2873 aa10.5□□□□□ -0.73
SMARCA4-217ENST00000591595 A0A1W2PPC4 97 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 FASLGP48023 281 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 MTCP1P56278 107 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 ZP4Q12836 540 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 TSTD1Q8NFU3 115 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 OR5H2Q8NGV7 314 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 ZC2HC1AQ96GY0 325 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 FAM110AQ9BQ89 295 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 PCNX3Q9H6A9 2034 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 KIAA2026Q5HYC2 2103 aa10.49□□□□□ -0.73
SMARCA4-217ENST00000591595 TRBV7-9A0A0J9YWB2 115 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms