RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 LPLP06858 475 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 ZNF182P17025 639 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-212ENST00000590096 DTYMKP23919 212 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 SOX6P35712 828 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 ZNF134P52741 427 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 CT45A1Q5HYN5 189 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 LY6G6FQ5SQ64 297 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 IZUMO1Q8IYV9 350 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 OR2AK2Q8NG84 335 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 OR4A4PQ8NGN8 299 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 CT45A3Q8NHU0 189 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 NUDCD2Q8WVJ2 157 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 MAFIPQ8WZ33 124 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 TCF19Q9Y242 345 aa17.16■□□□□ 0.34
ATG4D-212ENST00000590096 NBEAL1Q6ZS30 2694 aa17.15■□□□□ 0.34
ATG4D-212ENST00000590096 TMEM89A2RUT3 159 aa17.15■□□□□ 0.34
ATG4D-212ENST00000590096 XRCC3O43542 346 aa17.15■□□□□ 0.34
ATG4D-212ENST00000590096 ZBTB25P24278 435 aa17.15■□□□□ 0.34
ATG4D-212ENST00000590096 SPCS2Q15005 226 aa17.15■□□□□ 0.34
ATG4D-212ENST00000590096 SRSF7Q16629 238 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATG4D-212ENST00000590096 OR8H3Q8N146 312 aa17.15■□□□□ 0.34
ATG4D-212ENST00000590096 CMTM3Q96MX0 182 aa17.15■□□□□ 0.34
ATG4D-212ENST00000590096 GAPDHP04406 335 aaKnown RBP17.14■□□□□ 0.33
ATG4D-212ENST00000590096 CEACAM6P40199 344 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 ZNF816Q0VGE8 651 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-212ENST00000590096 FOXL1Q12952 345 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 DIAPH2-AS1Q14236 149 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 TMEM69Q5SWH9 247 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 Q6ZS49 121 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 LYG1Q8N1E2 194 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 ISOC1Q96CN7 298 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 AUNIPQ9H7T9 357 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 OR1A1Q9P1Q5 309 aa17.14■□□□□ 0.33
ATG4D-212ENST00000590096 A6NDX4 124 aa17.13■□□□□ 0.33
ATG4D-212ENST00000590096 APOA1P02647 267 aa17.13■□□□□ 0.33
ATG4D-212ENST00000590096 GSTT2P0CG29 244 aa17.13■□□□□ 0.33
ATG4D-212ENST00000590096 GSTT2BP0CG30 244 aa17.13■□□□□ 0.33
ATG4D-212ENST00000590096 REG1BP48304 166 aa17.13■□□□□ 0.33
ATG4D-212ENST00000590096 EDARADDQ8WWZ3 215 aa17.13■□□□□ 0.33
ATG4D-212ENST00000590096 ST6GALNAC5Q9BVH7 336 aa17.13■□□□□ 0.33
ATG4D-212ENST00000590096 C1RLQ9NZP8 487 aa17.13■□□□□ 0.33
ATG4D-212ENST00000590096 SMIM31A0A1B0GVY4 71 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 A0A1W2PPI3 338 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 CCDC160A6NGH7 325 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 H3BMQ9 156 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 TIMM23O14925 209 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 BET1O15155 118 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 TXNL1O43396 289 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 DIRAS3O95661 229 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 EIF4EP06730 217 aaKnown RBP17.12■□□□□ 0.33
ATG4D-212ENST00000590096 ZNF137PP52743 207 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 RAG2P55895 527 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 TMEM219Q86XT9 240 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 DRAM1Q8N682 238 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 OR4F5Q8NH21 305 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 OR56B4Q8NH76 319 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 CAPSLQ8WWF8 208 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 TAF15Q92804 592 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATG4D-212ENST00000590096 ST6GALNAC6Q969X2 333 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 CABLES2Q9BTV7 478 aa17.12■□□□□ 0.33
ATG4D-212ENST00000590096 IGHV1-3A0A0C4DH29 117 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 IGKV1-6A0A0C4DH72 117 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 ITGB1BP1O14713 200 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 ST8SIA5O15466 376 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 HPGDSO60760 199 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 NDUFA7O95182 113 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 FAM106CPP0CH98 169 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 CD24P25063 80 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 HERPUD1Q15011 391 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 IGSF11Q5DX21 431 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 C12orf54Q6X4T0 127 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 MOB3BQ86TA1 216 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 TGIF2LXQ8IUE1 241 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 DTX3Q8N9I9 347 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 OR10J5Q8NHC4 309 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 RTN4IP1Q8WWV3 396 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-212ENST00000590096 CEPT1Q9Y6K0 416 aa17.11■□□□□ 0.33
ATG4D-212ENST00000590096 FAM25AB3EWG3 89 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 FAM25CB3EWG5 89 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 FAM25GB3EWG6 89 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 CHST1O43916 411 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 SSX5O60225 188 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 COMPP49747 757 aaPredicted RBP17.1■□□□□ 0.33
ATG4D-212ENST00000590096 TAS2R20P59543 309 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 CCBE1Q6UXH8 406 aaPredicted RBP17.1■□□□□ 0.33
ATG4D-212ENST00000590096 GINS4Q9BRT9 223 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 RDH8Q9NYR8 311 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 CCDC59Q9P031 241 aaKnown RBP17.1■□□□□ 0.33
ATG4D-212ENST00000590096 PIPOXQ9P0Z9 390 aa17.1■□□□□ 0.33
ATG4D-212ENST00000590096 IGKV1D-8A0A087WSZ0 117 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 TRBV6-7A0A0A0MS04 114 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 LANCL1O43813 399 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 SNRNP70P08621 437 aaKnown RBP17.09■□□□□ 0.33
ATG4D-212ENST00000590096 ELK1P19419 428 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 CBX5P45973 191 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 RELBQ01201 579 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 HES1Q14469 280 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 AWAT1Q58HT5 328 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 C16orf82Q7Z2V1 217 aa17.09■□□□□ 0.33
ATG4D-212ENST00000590096 THNSL2Q86YJ6 484 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms