RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 TAGLN3Q9UI15 199 aa9.57□□□□□ -0.88
NEDD4L-227ENST00000590020 TRAPPC2LQ9UL33 140 aa9.57□□□□□ -0.88
NEDD4L-227ENST00000590020 DNAH6Q9C0G6 4158 aa9.57□□□□□ -0.88
NEDD4L-227ENST00000590020 DNAH2Q9P225 4427 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 SAA2-SAA4A0A096LPE2 208 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 CA2P00918 260 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 SAA2P0DJI9 122 aaPredicted RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 RCC1P18754 421 aaPredicted RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 ATP6V1E1P36543 226 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 RBM11P57052 281 aaKnown RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 ALKBH1Q13686 389 aaKnown RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 TRIM25Q14258 630 aaKnown RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 RPEL1Q2QD12 228 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 MORN2Q502X0 79 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 POC5Q8NA72 575 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 OR52N1Q8NH53 320 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 GRPEL2Q8TAA5 225 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 CANT1Q8WVQ1 401 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 MRPS24Q96EL2 167 aaKnown RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 WDR89Q96FK6 387 aaPredicted RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 PEF1Q9UBV8 284 aaKnown RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 WARS2Q9UGM6 360 aaKnown RBP9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 ING4Q9UNL4 249 aa9.56□□□□□ -0.88
NEDD4L-227ENST00000590020 A0A1W2PP11 408 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 HTR1AP08908 422 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 SERPINA2P20848 420 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 TNFRSF9Q07011 255 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 TATDN3Q17R31 274 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 C12orf73Q69YU5 71 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 ZNF833PQ6ZTB9 187 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 OR5D14Q8NGL3 314 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 OR2K2Q8NGT1 345 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 PHLDA1Q8WV24 401 aaPredicted RBP9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 CCDC124Q96CT7 223 aaKnown RBP9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 GGTLC1Q9BX51 225 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 PRRG3Q9BZD7 231 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 FAM107BQ9H098 131 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 IFT22Q9H7X7 185 aa9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 METTL1Q9UBP6 276 aaKnown RBP9.55□□□□□ -0.88
NEDD4L-227ENST00000590020 A0A1B0GVY2 172 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 OR4C45A6NMZ5 311 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 MAGEB3O15480 346 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 RBMXL2O75526 392 aaKnown RBP9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 MNAT1P51948 309 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 SERPINA12Q8IW75 414 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 LAX1Q8IWV1 398 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 STX19Q8N4C7 294 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 DYNLRB2Q8TF09 96 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 PEMTQ9UBM1 199 aa9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 DYNC1H1Q14204 4646 aaKnown RBP9.54□□□□□ -0.88
NEDD4L-227ENST00000590020 A0A0G2JLM5 398 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 ZAR1LA6NP61 321 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 OR2A4O95047 310 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 FADS2O95864 444 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 GSTP1P09211 210 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 FXYD3Q14802 87 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 DEFB114Q30KQ6 69 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 MOGAT2Q3SYC2 334 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 RPL39P5Q59GN2 51 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 C6orf183Q5T699 404 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 STEAP3Q658P3 488 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 ZNF343Q6P1L6 599 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 FDX2Q6P4F2 183 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 ZNF562Q6V9R5 426 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 ASCL4Q6XD76 172 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 BVESQ8NE79 360 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 METTL9Q9H1A3 318 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 TAF9BQ9HBM6 251 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 NDE1Q9NXR1 346 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 TAS2R4Q9NYW5 299 aa9.53□□□□□ -0.88
NEDD4L-227ENST00000590020 LOC102724200A0A096LPH7 203 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 MSGN1A6NI15 193 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 H7C2Y5 167 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 J3QLW9 94 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 ST8SIA5O15466 376 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 FAM107AO95990 144 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 APELAP0DMC3 54 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 CT45A6P0DMU7 189 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 CT45A5P0DMU8 189 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 CT45A7P0DMV0 189 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 ZNF19P17023 458 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 RAB3AP20336 220 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 CCR9P51686 369 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 PSG5Q15238 335 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 DEFB135Q30KP9 77 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 KCTD20Q7Z5Y7 419 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 PARP16Q8N5Y8 322 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 TSEN15Q8WW01 171 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 PELI1Q96FA3 418 aa9.52□□□□□ -0.89
NEDD4L-227ENST00000590020 B2RBV5 119 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 SLC16A6O15403 523 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 SPRY2O43597 315 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 NDUFB8O95169 186 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 SOX2P48431 317 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 TMEM30BQ3MIR4 351 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 NHLRC3Q5JS37 347 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 C4orf36Q96KX1 117 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 PDCD1LG2Q9BQ51 273 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 IFI27L2Q9H2X8 130 aa9.51□□□□□ -0.89
NEDD4L-227ENST00000590020 RAB9BQ9NP90 201 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms