RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 OR4F4Q96R69 305 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 MND1Q9BWT6 205 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 MMP28Q9H239 520 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 DCLRE1BQ9H816 532 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 CHMP1AQ9HD42 196 aaPredicted RBP6.57□□□□□ -1.36
DNMT1-219ENST00000589349 KCNIP1Q9NZI2 227 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 CNOT2Q9NZN8 540 aaKnown RBP6.57□□□□□ -1.36
DNMT1-219ENST00000589349 ZNF581Q9P0T4 197 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 PSORS1C1Q9UIG5 152 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 PEX16Q9Y5Y5 336 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 TENM1Q9UKZ4 2725 aa6.57□□□□□ -1.36
DNMT1-219ENST00000589349 KIAA2026Q5HYC2 2103 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 IGHV3-72A0A0B4J1Y9 119 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 MAGEA13PA6NCF6 341 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 J3QR06 171 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 CCRL2O00421 344 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 SPINT2O43291 252 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 SPRY2O43597 315 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 SNRNP70P08621 437 aaKnown RBP6.56□□□□□ -1.36
DNMT1-219ENST00000589349 GZMHP20718 246 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 IL3RAP26951 378 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 VHLP40337 213 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 DYNLT3P51808 116 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 GPR50Q13585 617 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 MPV17LQ2QL34 196 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 ACSM3Q53FZ2 586 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 PDLIM3Q53GG5 364 aaPredicted RBP6.56□□□□□ -1.36
DNMT1-219ENST00000589349 RBM48Q5RL73 367 aaKnown RBP6.56□□□□□ -1.36
DNMT1-219ENST00000589349 RSBN1Q5VWQ0 802 aaPredicted RBP6.56□□□□□ -1.36
DNMT1-219ENST00000589349 C16orf82Q7Z2V1 217 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 CEACAM19Q7Z692 300 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 LINC00596Q86U02 117 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 OR4X2Q8NGF9 303 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 SGCDQ92629 289 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 RBM14Q96PK6 669 aaKnown RBP6.56□□□□□ -1.36
DNMT1-219ENST00000589349 NEDD4LQ96PU5 975 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 CITED2Q99967 270 aaPredicted RBP6.56□□□□□ -1.36
DNMT1-219ENST00000589349 VCX3BQ9H321 246 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 SPACA1Q9HBV2 294 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 RAB9BQ9NP90 201 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 MGAT4CQ9UBM8 478 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 PSG11Q9UQ72 335 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 TPRKBQ9Y3C4 175 aa6.56□□□□□ -1.36
DNMT1-219ENST00000589349 TET2Q6N021 2002 aaPredicted RBP6.55□□□□□ -1.36
DNMT1-219ENST00000589349 TRBV5-5A0A0J9YX44 114 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 CGB1A6NKQ9 187 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 SERPINE3A8MV23 424 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 OR2F2O95006 317 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 IGKV1D-33P01593 117 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 IGKV1-33P01594 117 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 PRB2P02812 416 aaPredicted RBP6.55□□□□□ -1.36
DNMT1-219ENST00000589349 OPN1MWP04001 364 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 GAPDHP04406 335 aaKnown RBP6.55□□□□□ -1.36
DNMT1-219ENST00000589349 CDK1P06493 297 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 NHLRC4P0CG21 123 aaPredicted RBP6.55□□□□□ -1.36
DNMT1-219ENST00000589349 OPN1MW2P0DN77 364 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 OPN1MW3P0DN78 364 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 MGMTP16455 207 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 IGFBP3P17936 291 aaPredicted RBP6.55□□□□□ -1.36
DNMT1-219ENST00000589349 RAB7AP51149 207 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 AQP4P55087 323 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 SPHARQ15513 63 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 HSD17B12Q53GQ0 312 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 C6orf141Q5SZD1 244 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 UTF1Q5T230 341 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 C6orf183Q5T699 404 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 SYT6Q5T7P8 510 aaPredicted RBP6.55□□□□□ -1.36
DNMT1-219ENST00000589349 GLT8D1Q68CQ7 371 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 NANOGP1Q8N7R0 232 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 NKAIN3Q8N8D7 197 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 DDB2Q92466 427 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 THRSPQ92748 146 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 UFD1Q92890 307 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 RITA1Q96K30 269 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 DERL3Q96Q80 235 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 CST11Q9H112 138 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 SLC25A32Q9H2D1 315 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 PLGRKTQ9HBL7 147 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 IL36GQ9NZH8 169 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 MOB4Q9Y3A3 225 aa6.55□□□□□ -1.36
DNMT1-219ENST00000589349 TRBV5-7A0A0A0MS05 114 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 OOSP1A8MZH6 123 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 G3V4G9 280 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 M0QZK8 103 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 HSD17B6O14756 317 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 CASQ2O14958 399 aaPredicted RBP6.54□□□□□ -1.36
DNMT1-219ENST00000589349 IGLV1-47P01700 117 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 MT-ND4P03905 459 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 FUT3P21217 361 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 CD34P28906 385 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 RAB25P57735 213 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 RPS11P62280 158 aaKnown RBP eCLIP6.54□□□□□ -1.36
DNMT1-219ENST00000589349 DIAPH2-AS1Q14236 149 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 INSL4Q14641 139 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 SRSF7Q16629 238 aaKnown RBP eCLIP6.54□□□□□ -1.36
DNMT1-219ENST00000589349 FAM27D1Q5T7N8 215 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 LIPKQ5VXJ0 399 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 ASCL4Q6XD76 172 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 ZNF329Q86UD4 541 aa6.54□□□□□ -1.36
DNMT1-219ENST00000589349 NDUFA11Q86Y39 141 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms