RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 TBPL2Q6SJ96 375 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 ST20-AS1Q8NBB2 130 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 KCTD4Q8WVF5 259 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 ASB17Q8WXJ9 295 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 EBNA1BP2Q99848 306 aaKnown RBP4.67□□□□□ -1.66
VMP1-208ENST00000588617 OR51I1Q9H343 314 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 SLC2A9Q9NRM0 540 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 ARAP1Q96P48 1450 aa4.67□□□□□ -1.66
VMP1-208ENST00000588617 EVPLLA8MZ36 301 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 REG1AP05451 166 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 CD36P16671 472 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 ZNF708P17019 499 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 GABRA3P34903 492 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 MRPS25P82663 173 aaKnown RBP4.66□□□□□ -1.66
VMP1-208ENST00000588617 TMEM267Q0VDI3 215 aaPredicted RBP4.66□□□□□ -1.66
VMP1-208ENST00000588617 EBPQ15125 230 aaKnown RBP4.66□□□□□ -1.66
VMP1-208ENST00000588617 MAPK14Q16539 360 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 LRRC75BQ2VPJ9 315 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 OR2V2Q96R30 315 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 MED18Q9BUE0 208 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 ALX4Q9H161 411 aaPredicted RBP4.66□□□□□ -1.66
VMP1-208ENST00000588617 ZNF492Q9P255 531 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 ZNF230Q9UIE0 474 aaPredicted RBP4.66□□□□□ -1.66
VMP1-208ENST00000588617 LSM5Q9Y4Y9 91 aaKnown RBP4.66□□□□□ -1.66
VMP1-208ENST00000588617 PLA2R1Q13018 1463 aa4.66□□□□□ -1.66
VMP1-208ENST00000588617 RPRD2Q5VT52 1461 aaKnown RBP4.66□□□□□ -1.66
VMP1-208ENST00000588617 NPATQ14207 1427 aa4.65□□□□□ -1.66
VMP1-208ENST00000588617 FYCO1Q9BQS8 1478 aa4.65□□□□□ -1.66
VMP1-208ENST00000588617 NAA20P61599 178 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 CASP8Q14790 479 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 CYHR1Q6ZMK1 362 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 OSR2Q8N2R0 312 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 KRTCAP2Q8N6L1 136 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 APCDD1LQ8NCL9 501 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 OR2V1Q8NHB1 315 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 YIPF5Q969M3 257 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 CMBLQ96DG6 245 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 STARD4Q96DR4 205 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 ZNF285Q96NJ3 590 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 TRIB3Q96RU7 358 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 SPIN2AQ99865 258 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 SPIN2BQ9BPZ2 258 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 GABARAPL1Q9H0R8 117 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 C11orf49Q9H6J7 331 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 KCNIP2Q9NS61 270 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 ZNF586Q9NXT0 402 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 S4R3C0 116 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 KIAA0586Q9BVV6 1533 aa4.65□□□□□ -1.67
VMP1-208ENST00000588617 EIF4G3O43432 1585 aaKnown RBP4.65□□□□□ -1.67
VMP1-208ENST00000588617 TGIF2-C20orf24A0A0A6YYL0 155 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 C5orf49A4QMS7 147 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 H3BSA7 217 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 ZNF324O75467 553 aaPredicted RBP4.64□□□□□ -1.67
VMP1-208ENST00000588617 GPR75O95800 540 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 TRGV3P03979 118 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 GYPCP04921 128 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 TGFBR2P37173 567 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 HSPA9P38646 679 aaKnown RBP4.64□□□□□ -1.67
VMP1-208ENST00000588617 REG1BP48304 166 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 DEFA6Q01524 100 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 IHHQ14623 411 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 ZCWPW2Q504Y3 356 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 GNB1LQ9BYB4 327 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 DNAJC12Q9UKB3 198 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 SAMD9Q5K651 1589 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 PBRM1Q86U86 1689 aa4.64□□□□□ -1.67
VMP1-208ENST00000588617 CASKIN1Q8WXD9 1431 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 GRIN2AQ12879 1464 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 UGGT2Q9NYU1 1516 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 D6RAR5 112 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 PDYNP01213 254 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 IGLV7-43P04211 117 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 IDH3GP51553 393 aaPredicted RBP4.63□□□□□ -1.67
VMP1-208ENST00000588617 SNAP25P60880 206 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 HLA-DRB3P79483 266 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 CCL7P80098 99 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 FABP5Q01469 135 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 OR2F1Q13607 317 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 Q8WTZ3 238 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 OTUB2Q96DC9 234 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 OR52B2Q96RD2 323 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 SDHCQ99643 169 aaPredicted RBP4.63□□□□□ -1.67
VMP1-208ENST00000588617 MED28Q9H204 178 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 CTTNBP2Q8WZ74 1663 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 NUP160Q12769 1436 aa4.63□□□□□ -1.67
VMP1-208ENST00000588617 IQGAP2Q13576 1575 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 IGLV3-12A0A075B6K2 115 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 TRAV8-1A0A0A6YYK1 113 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.62□□□□□ -1.67
VMP1-208ENST00000588617 MRASO14807 208 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 KRT75O95678 551 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 CGB3P0DN86 165 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 CGB7P0DN87 165 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 HSD11B1P28845 292 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 DDTP30046 118 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 SULT1A1P50225 295 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 RPS24P62847 133 aaKnown RBP4.62□□□□□ -1.67
VMP1-208ENST00000588617 HERVK_113P63121 156 aa4.62□□□□□ -1.67
VMP1-208ENST00000588617 SRSF6Q13247 344 aaKnown RBP4.62□□□□□ -1.67
VMP1-208ENST00000588617 JOSD1Q15040 202 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms