RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CCDC71LQ8N9Z2 235 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 UXS1Q8NBZ7 420 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 ZNF714Q96N38 554 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 PHB2Q99623 299 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 GAL3ST2Q9H3Q3 398 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 GFOD1Q9NXC2 390 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 IDI2-AS1Q9NZ38 188 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 MGAT4CQ9UBM8 478 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 PTPN13Q12923 2485 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 DOPEY2Q9Y3R5 2298 aa21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 GCN1Q92616 2671 aaKnown RBP21.44■■□□□ 1.02
SCAMP4-210ENST00000588555 CCL3L1P16619 93 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 ANKRD55Q3KP44 614 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 NRGNQ92686 78 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 AGMATQ9BSE5 352 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 PRR13Q9NZ81 148 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 DBX1A6NMT0 343 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 MPPED1O15442 326 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 IFNA2P01563 188 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 DLX6P56179 175 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 TMEM30BQ3MIR4 351 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 LIN54Q6MZP7 749 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 OR52M1Q8NGK5 317 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 PSMG3-AS1Q96PY0 264 aa21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 RBM7Q9Y580 266 aaKnown RBP21.43■■□□□ 1.02
SCAMP4-210ENST00000588555 A0A0B4J2A0 478 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 HNRNPCP07910 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 PRAMEF5Q5TYX0 476 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 HEPN1Q6WQI6 88 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 CMTM1Q8IZ96 169 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 OR10A7Q8NGE5 316 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 AKR1E2Q96JD6 320 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 GPHA2Q96T91 129 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 NARFLQ9H6Q4 476 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 SHPKQ9UHJ6 478 aa21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 RPUSD1Q9UJJ7 312 aaKnown RBP21.42■■□□□ 1.02
SCAMP4-210ENST00000588555 TBC1D26Q86UD7 250 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 TCTE3Q8IZS6 198 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 FAM216AQ8WUB2 273 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 EDARADDQ8WWZ3 215 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 OR2D2Q9H210 308 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 PGLYRP1O75594 196 aaPredicted RBP21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 SLC22A5O76082 557 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 OR5AC1P0C628 307 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 ZNF134P52741 427 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 ERVFRD-1P60508 538 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 DRAM1Q8N682 238 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 ZNF645Q8N7E2 425 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 C8orf46Q8TAG6 207 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 C5orf30Q96GV9 206 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 ZNF436Q9C0F3 470 aaPredicted RBP21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 KCNS2Q9ULS6 477 aa21.41■■□□□ 1.02
SCAMP4-210ENST00000588555 YLPM1P49750 1951 aaKnown RBP21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 GOSR2O14653 212 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 RGS11O94810 467 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 ANXA3P12429 323 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 PAX1P15863 534 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 HLA-GP17693 338 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 H2BFSP57053 126 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 TMEM187Q14656 261 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 LY6G6FQ5SQ64 297 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 TP53RKQ96S44 253 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 BPESC1Q9GZL8 116 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 RNF150Q9ULK6 438 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 PSG11Q9UQ72 335 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 KCNIP3Q9Y2W7 256 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 ARID1AO14497 2285 aa21.4■■□□□ 1.02
SCAMP4-210ENST00000588555 ITGB1BP1O14713 200 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 ST8SIA5O15466 376 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 TNFSF12O43508 249 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 PDLIM4P50479 330 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 MSMO1Q15800 293 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 SP6Q3SY56 376 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 ZNF787Q6DD87 383 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 C11orf88Q6PI97 169 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 C11orf42Q8N5U0 333 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 ZNF439Q8NDP4 499 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 COQ8AQ8NI60 647 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 GLYATL2Q8WU03 294 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 LEAP2Q969E1 77 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 SUCNR1Q9BXA5 334 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 PIPOXQ9P0Z9 390 aa21.39■■□□□ 1.01
SCAMP4-210ENST00000588555 C3orf85A0A1B0GTC6 90 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 OR2A4O95047 310 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 SIX6O95475 246 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 IGHV3-7P01780 117 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 NFYBP25208 207 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 DCAF12L2Q5VW00 463 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 KCTD9Q7L273 389 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 OR2A7Q96R45 310 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 BARX1Q9HBU1 254 aaPredicted RBP21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 ABCA12Q86UK0 2595 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 CSMD2Q7Z408 3487 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 ATP5J2P56134 94 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 EIF4EBP1Q13541 118 aaPredicted RBP21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 LY6G5BQ8NDX9 201 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 OR5M8Q8NGP6 311 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 ABHD14BQ96IU4 210 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 DMRTB1Q96MA1 342 aa21.38■■□□□ 1.01
SCAMP4-210ENST00000588555 POLQO75417 2590 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms