RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 C12orf4Q9NQ89 552 aa8.33□□□□□ -1.08
TPM4-209ENST00000588483 PLSCR3Q9NRY6 295 aa8.33□□□□□ -1.08
TPM4-209ENST00000588483 TXNL4BQ9NX01 149 aaKnown RBP8.33□□□□□ -1.08
TPM4-209ENST00000588483 AK3Q9UIJ7 227 aa8.33□□□□□ -1.08
TPM4-209ENST00000588483 STUB1Q9UNE7 303 aa8.33□□□□□ -1.08
TPM4-209ENST00000588483 NOTCH3Q9UM47 2321 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 PLXNB1O43157 2135 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 PEX14O75381 377 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 DIRAS3O95661 229 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 MOSP00540 346 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 IGHG2P01859 326 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 OPN1MWP04001 364 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 OPN1MW2P0DN77 364 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 OPN1MW3P0DN78 364 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 PPP1CCP36873 323 aaKnown RBP8.32□□□□□ -1.08
TPM4-209ENST00000588483 REG1BP48304 166 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 VEGFCP49767 419 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 HLA-DRB3P79483 266 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 PLA2G7Q13093 441 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 LSAMPQ13449 338 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 HES1Q14469 280 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 ARSJQ5FYB0 599 aaPredicted RBP8.32□□□□□ -1.08
TPM4-209ENST00000588483 HES5Q5TA89 166 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 C22orf42Q6IC83 251 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 ZNF833PQ6ZTB9 187 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 MOB3BQ86TA1 216 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 TPRA1Q86W33 373 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 FAM71E2Q8N5Q1 922 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 AGMATQ9BSE5 352 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 PECRQ9BY49 303 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 TOLLIPQ9H0E2 274 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 IFI27L2Q9H2X8 130 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 Q9N2K0 584 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 LIN7CQ9NUP9 197 aaKnown RBP8.32□□□□□ -1.08
TPM4-209ENST00000588483 ABRACLQ9P1F3 81 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 KCNK7Q9Y2U2 307 aa8.32□□□□□ -1.08
TPM4-209ENST00000588483 NOTOA8MTQ0 251 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 RAB27BO00194 218 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 MFNGO00587 321 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 SRSF7Q16629 238 aaKnown RBP eCLIP8.31□□□□□ -1.08
TPM4-209ENST00000588483 TCTEX1D4Q5JR98 221 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 C5orf24Q7Z6I8 188 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 LYG1Q8N1E2 194 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 C11orf44Q8N8P7 122 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 Q8N9W7 124 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 OR2AK2Q8NG84 335 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 OR5AU1Q8NGC0 362 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 CITED2Q99967 270 aaPredicted RBP8.31□□□□□ -1.08
TPM4-209ENST00000588483 ZNF251Q9BRH9 671 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 HDHD3Q9BSH5 251 aaPredicted RBP8.31□□□□□ -1.08
TPM4-209ENST00000588483 ABCG5Q9H222 651 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 CHMP1AQ9HD42 196 aaPredicted RBP8.31□□□□□ -1.08
TPM4-209ENST00000588483 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.31□□□□□ -1.08
TPM4-209ENST00000588483 ZNF580Q9UK33 172 aa8.31□□□□□ -1.08
TPM4-209ENST00000588483 SAA2-SAA4A0A096LPE2 208 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 IGHV3-72A0A0B4J1Y9 119 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 SH2D7A6NKC9 451 aaPredicted RBP8.3□□□□□ -1.08
TPM4-209ENST00000588483 SERPINE3A8MV23 424 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 ZNF736B4DX44 427 aaPredicted RBP8.3□□□□□ -1.08
TPM4-209ENST00000588483 SAA2P0DJI9 122 aaPredicted RBP8.3□□□□□ -1.08
TPM4-209ENST00000588483 HIST1H1DP16402 221 aaKnown RBP8.3□□□□□ -1.08
TPM4-209ENST00000588483 ZBTB25P24278 435 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 SCAND1P57086 179 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 MOGAT2Q3SYC2 334 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 Q6ZS49 121 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 CENPVQ7Z7K6 275 aaPredicted RBP8.3□□□□□ -1.08
TPM4-209ENST00000588483 OR4F17Q8NGA8 305 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 OR4X2Q8NGF9 303 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 OR10R2Q8NGX6 335 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 FAM110DQ8TAY7 271 aaPredicted RBP8.3□□□□□ -1.08
TPM4-209ENST00000588483 CHPT1Q8WUD6 406 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 EDARADDQ8WWZ3 215 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 RAB3CQ96E17 227 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 OR4F4Q96R69 305 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 NABP2Q9BQ15 211 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 CMSS1Q9BQ75 279 aaKnown RBP8.3□□□□□ -1.08
TPM4-209ENST00000588483 CABLES2Q9BTV7 478 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 PIPOXQ9P0Z9 390 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 SLC23A1Q9UHI7 598 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 SSR3Q9UNL2 185 aa8.3□□□□□ -1.08
TPM4-209ENST00000588483 IGKV1-6A0A0C4DH72 117 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 METTL21EPA6NDL7 271 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 TRDCB7Z8K6 153 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 RAB29O14966 203 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 KCNAB3O43448 404 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 TMEM127O75204 238 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 GADD45AP24522 165 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 HNF4GQ14541 408 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 ARL6IP1Q15041 203 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 HIST2H2BDQ6DRA6 164 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 SLC35E3Q7Z769 313 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 COMMD1Q8N668 190 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 OR4A4PQ8NGN8 299 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 IL1F10Q8WWZ1 152 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 KCTD7Q96MP8 289 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 S1PR3Q99500 378 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 CENPOQ9BU64 300 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 MRPL20Q9BYC9 149 aaKnown RBP8.29□□□□□ -1.08
TPM4-209ENST00000588483 OR51E2Q9H255 320 aa8.29□□□□□ -1.08
TPM4-209ENST00000588483 TSSC4Q9Y5U2 329 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms