RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 UBALD1Q8TB05 177 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 MBNL3Q9NUK0 354 aaKnown RBP11.71□□□□□ -0.53
VAPA-209ENST00000585042 KCNIP1Q9NZI2 227 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 ZNF107Q9UII5 783 aaPredicted RBP11.71□□□□□ -0.53
VAPA-209ENST00000585042 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.53
VAPA-209ENST00000585042 MRPS28Q9Y2Q9 187 aaKnown RBP11.71□□□□□ -0.53
VAPA-209ENST00000585042 PEX16Q9Y5Y5 336 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 DNAH9Q9NYC9 4486 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 TRBV5-7A0A0A0MS05 114 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 A0A1W2PP11 408 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 I3L521 148 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 IGLV1-40P01703 118 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 RPS11P62280 158 aaKnown RBP eCLIP11.7□□□□□ -0.54
VAPA-209ENST00000585042 KIAA0141Q14154 515 aaPredicted RBP11.7□□□□□ -0.54
VAPA-209ENST00000585042 ZNF260Q3ZCT1 412 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 FAM53AQ6NSI3 398 aaPredicted RBP11.7□□□□□ -0.54
VAPA-209ENST00000585042 GLIPR1L1Q6UWM5 242 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 ZNF491Q8N8L2 437 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 OR4K15Q8NH41 348 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 UFD1Q92890 307 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 PGLYRP3Q96LB9 341 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 PRR25Q96S07 402 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 OR2S2Q9NQN1 319 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 GHRLQ9UBU3 117 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 JPT1Q9UK76 154 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 VSIG4Q9Y279 399 aa11.7□□□□□ -0.54
VAPA-209ENST00000585042 TRAV8-7A0A075B6U6 113 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 DENRO43583 198 aaKnown RBP11.69□□□□□ -0.54
VAPA-209ENST00000585042 YPEL1O60688 119 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 MRPS14O60783 128 aaKnown RBP11.69□□□□□ -0.54
VAPA-209ENST00000585042 RGS11O94810 467 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 HLA-DRB1P01911 266 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 RCC1P18754 421 aaPredicted RBP11.69□□□□□ -0.54
VAPA-209ENST00000585042 ZNF616Q08AN1 781 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 IRF3Q14653 427 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 MMDQ15546 238 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 ZNF429Q86V71 674 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 JAGN1Q8N5M9 183 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 OR1N2Q8NGR9 330 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 OR1L1Q8NH94 360 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 MUL1Q969V5 352 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 ORAI1Q96D31 301 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 YPEL2Q96QA6 119 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 OR14A2Q96R54 314 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 OR51J1Q9H342 316 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 TAF9BQ9HBM6 251 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 ISYNA1Q9NPH2 558 aa11.69□□□□□ -0.54
VAPA-209ENST00000585042 HSMCR30P0CW71 290 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 MGMTP16455 207 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 ACTBP60709 375 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 DOC2BQ14184 412 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 TRAM1Q15629 374 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 LIN54Q6MZP7 749 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 LYPD6Q86Y78 171 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 PRR18Q8N4B5 295 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 MINDY2Q8NBR6 621 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 NPBQ8NG41 125 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 OR10V1Q8NGI7 309 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 Q96M66 194 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 ZNF251Q9BRH9 671 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 UQCC2Q9BRT2 126 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 ABHD14AQ9BUJ0 271 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 YTHDF1Q9BYJ9 559 aaKnown RBP11.68□□□□□ -0.54
VAPA-209ENST00000585042 SELENOIQ9C0D9 397 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 LSM2Q9Y333 95 aaKnown RBP11.68□□□□□ -0.54
VAPA-209ENST00000585042 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
VAPA-209ENST00000585042 MAGEA13PA6NCF6 341 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 PDCD6O75340 191 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 PSMA1P25786 263 aaKnown RBP11.67□□□□□ -0.54
VAPA-209ENST00000585042 RAB9AP51151 201 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 GABARAPL2P60520 117 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 ACSM3Q53FZ2 586 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 FAM27D1Q5T7N8 215 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 AWAT2Q6E213 333 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 ODF3L1Q8IXM7 274 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 SVOPQ8N4V2 548 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 NKAIN3Q8N8D7 197 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 GALMQ96C23 342 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 DERL3Q96Q80 235 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 NABP2Q9BQ15 211 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 TMED9Q9BVK6 235 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 CST11Q9H112 138 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 KLK15Q9H2R5 256 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 GHITMQ9H3K2 345 aa11.67□□□□□ -0.54
VAPA-209ENST00000585042 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 TRAV41A0A0B4J266 112 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 A0A1W2PPK0 400 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 NBR2O15453 112 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 CRTAPO75718 401 aaPredicted RBP11.66□□□□□ -0.54
VAPA-209ENST00000585042 NDUFA3O95167 84 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 SLC2A2P11168 524 aaPredicted RBP11.66□□□□□ -0.54
VAPA-209ENST00000585042 CRIP2P52943 208 aaPredicted RBP11.66□□□□□ -0.54
VAPA-209ENST00000585042 MLLT11Q13015 90 aaPredicted RBP11.66□□□□□ -0.54
VAPA-209ENST00000585042 TPBGQ13641 420 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 LIPKQ5VXJ0 399 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 ZNF660Q6AZW8 331 aaPredicted RBP11.66□□□□□ -0.54
VAPA-209ENST00000585042 SIGIRRQ6IA17 410 aa11.66□□□□□ -0.54
VAPA-209ENST00000585042 FAM71F2Q6NXP2 309 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms