RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 OR52E4Q8NGH9 312 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 LRRC45Q96CN5 670 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 SMIM12Q96EX1 92 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 MBOAT7Q96N66 472 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 FAM210AQ96ND0 272 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 MED18Q9BUE0 208 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 TTTY12Q9BZ98 90 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 ASCL3Q9NQ33 180 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 MRPS16Q9Y3D3 137 aaKnown RBP1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 OR51B4Q9Y5P0 310 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 LRPPRCP42704 1394 aaKnown RBP1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 TRPM6Q9BX84 2022 aa1.44□□□□□ -2.18
PPP4R1-227ENST00000583988 CRB1P82279 1406 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 GRIFINA4D1Z8 144 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 LINC00862A6NCI5 91 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 C9J4A7 227 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 TRAPPC3O43617 180 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 ZNF189O75820 626 aaPredicted RBP1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 PSMB3P49720 205 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 FGF12P61328 243 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 SS18Q15532 418 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 TRMT12Q53H54 448 aaKnown RBP1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 SCGB1D4Q6XE38 83 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 SPATA24Q86W54 205 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 YIPF7Q8N8F6 280 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 ZNRF2Q8NHG8 242 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 SUN5Q8TC36 379 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 TMEM56Q96MV1 263 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 ACBD6Q9BR61 282 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 ZNF251Q9BRH9 671 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 MED10Q9BTT4 135 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 NDEL1Q9GZM8 345 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 CD300AQ9UGN4 299 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 PSMD13Q9UNM6 376 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 SLX4Q8IY92 1834 aa1.43□□□□□ -2.18
PPP4R1-227ENST00000583988 ADGRB3O60242 1522 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 KDM5BQ9UGL1 1544 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 GBF1Q92538 1859 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 LINC00854A0A1B0GVQ3 168 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 TMEM213A2RRL7 107 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 MKRN2OSH3BPM6 223 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 CDK14O94921 469 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 CDK2P24941 298 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 CD151P48509 253 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 CLEC6AQ6EIG7 209 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 NATD1Q8N6N6 113 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 ATP6V1C2Q8NEY4 427 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 OR11H1Q8NG94 326 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 OR10A6Q8NH74 314 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 RNASE11Q8TAA1 199 aaKnown RBP1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 Q9BRP9 147 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 GNB1LQ9BYB4 327 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 EIF5A2Q9GZV4 153 aaKnown RBP1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 C11orf1Q9H5F2 150 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 HHLA2Q9UM44 414 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 SNX10Q9Y5X0 201 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 GMEB1Q9Y692 573 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 ATG2BQ96BY7 2078 aa1.42□□□□□ -2.18
PPP4R1-227ENST00000583988 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 DSCAML1Q8TD84 2053 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 ICE1Q9Y2F5 2266 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 C19orf71A6NCJ1 209 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 GOLGA8RI6L899 631 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 UBFD1O14562 309 aaKnown RBP1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 SCN2BO60939 215 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 LY6HO94772 140 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 BRI3O95415 125 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 YEATS4O95619 227 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 IGLV3-27P01718 113 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 CD7P09564 240 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 SLC25A16P16260 332 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 CD36P16671 472 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 CFL1P23528 166 aaKnown RBP1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 NPPCP23582 126 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 AGTR1P30556 359 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 KDELR2P33947 212 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 OR1E2P47887 323 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 ZNF140P52738 457 aaPredicted RBP1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 SLAMF1Q13291 335 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 XRCC4Q13426 336 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 PDGFRLQ15198 375 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 FAM229BQ4G0N7 80 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 CRLF3Q8IUI8 442 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 FNDC9Q8TBE3 224 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 TNFAIP8L1Q8WVP5 186 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 TRNT1Q96Q11 434 aaKnown RBP1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 CDCA4Q9BXL8 241 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 C1orf109Q9NX04 203 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 FAM206AQ9NX38 181 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 GLS2Q9UI32 602 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 DNAJC12Q9UKB3 198 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 PIK3R4Q99570 1358 aa1.41□□□□□ -2.18
PPP4R1-227ENST00000583988 OTOGLQ3ZCN5 2332 aa1.4□□□□□ -2.18
PPP4R1-227ENST00000583988 IGHV3-73A0A0B4J1V6 119 aa1.4□□□□□ -2.19
PPP4R1-227ENST00000583988 TMEM235A6NFC5 223 aa1.4□□□□□ -2.19
PPP4R1-227ENST00000583988 TRPC5OSA6NMA1 111 aa1.4□□□□□ -2.19
PPP4R1-227ENST00000583988 IQCF5A8MTL0 148 aa1.4□□□□□ -2.19
PPP4R1-227ENST00000583988 F8VZ95 297 aa1.4□□□□□ -2.19
PPP4R1-227ENST00000583988 H3BPC8 53 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms