RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 MUC1P15941 1255 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF823P16415 610 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 AKR1C4P17516 323 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ACKR3P25106 362 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 NFYBP25208 207 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 SNCAP37840 140 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 EIF1P41567 113 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 CEBPDP49716 269 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 RAB5CP51148 216 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 AKR1D1P51857 326 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 POLR2HP52434 150 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 SUPT4H1P63272 117 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF117Q03924 483 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 GLO1Q04760 184 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 MFGE8Q08431 387 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 SIGLEC14Q08ET2 396 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 SRSF5Q13243 272 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 UNC119Q13432 240 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 EIF2B1Q14232 305 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 SMCO1Q147U7 214 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ARL6IP1Q15041 203 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 SCGB2B2Q4G0G5 96 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 BEX5Q5H9J7 111 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 DNLZQ5SXM8 178 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 GPR157Q5UAW9 335 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OR10K2Q6IF99 312 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 DNM1P34Q6PK57 102 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OPN5Q6U736 354 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 DHRS11Q6UWP2 260 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 CLEC18BQ6UXF7 455 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF841Q6ZN19 808 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OOSP2Q86WS3 158 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 CBLN2Q8IUK8 224 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 GVQW1Q8N7I0 195 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 LINC00469Q8N7U9 141 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 UBAC2Q8NBM4 344 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC26A10Q8NG04 563 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OR4S1Q8NGB4 309 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OR51A2Q8NGJ7 313 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OR4K15Q8NH41 348 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OR10G6Q8NH81 332 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 MFSD8Q8NHS3 518 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 KCNG3Q8TAE7 436 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 MARCH1Q8TCQ1 289 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 GPR119Q8TDV5 335 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 RNF133Q8WVZ7 376 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 DCUN1D4Q92564 292 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 EMG1Q92979 244 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 HIST1H2BAQ96A08 127 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM230Q96A57 120 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 FGGYQ96C11 551 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ARL5BQ96KC2 179 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OR10C1Q96KK4 312 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 C1orf147Q96MC9 270 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 NKX3-1Q99801 234 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 MICU1Q9BPX6 476 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 CMSS1Q9BQ75 279 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF251Q9BRH9 671 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 PLA2G2FQ9BZM2 168 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 LPAR5Q9H1C0 372 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 UCK1Q9HA47 277 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 FN3KRPQ9HA64 309 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM60AQ9NP50 221 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ASF1BQ9NVP2 202 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM206AQ9NX38 181 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 OR5AC2Q9NZP5 309 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF319Q9P2F9 582 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 MYEF2Q9P2K5 600 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 CTSZQ9UBR2 303 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 NOSIPQ9Y314 301 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 MEMO1Q9Y316 297 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 MMACHCQ9Y4U1 282 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 FLVCR1Q9Y5Y0 555 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 PTPRSQ13332 1948 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 TICRRQ7Z2Z1 1910 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 MKI67P46013 3256 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 UNC80Q8N2C7 3258 aa3.12□□□□□ -1.91
SMCHD1-208ENST00000583344 EML5Q05BV3 1969 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 CENPFP49454 3210 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 IGKV3D-11A0A0A0MRZ8 115 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 A0A0A6YYD4 124 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 LOC102725191A0A1B0GVB3 256 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 LOC107986453A0A1B0GWG9 222 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 HELTA6NFD8 242 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 SHISA7A6NL88 538 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 SHISA9B4DS77 424 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 C2CD4DB7Z1M9 353 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 C9JQL5 133 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 H7C1C5 153 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 MPZL1O95297 269 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 IGLV3-1P01715 115 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 PMP2P02689 132 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 FABP1P07148 127 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 H2BFMP0C1H6 154 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 HIST1H1DP16402 221 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 CTLA4P16410 223 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF708P17019 499 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 CCL1P22362 96 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 HRH1P35367 487 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 RPS27P42677 84 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms