RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 POLR3HQ9Y535 204 aaPredicted RBP1.6□□□□□ -2.15
COPS3-217ENST00000583160 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
COPS3-217ENST00000583160 ARHGAP32A7KAX9 2087 aa1.6□□□□□ -2.15
COPS3-217ENST00000583160 PLXNB1O43157 2135 aa1.6□□□□□ -2.15
COPS3-217ENST00000583160 MGAM2Q2M2H8 2515 aa1.6□□□□□ -2.15
COPS3-217ENST00000583160 A0A087WUJ7 227 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 TMED7-TICAM2A0A0A6YYA0 188 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 IGHV2OR16-5A0A0B4J2B6 119 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 IGHV1-18A0A0C4DH31 117 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 TMEM72A0PK05 275 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ZNF726A6NNF4 738 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ZNF99A8MXY4 864 aaPredicted RBP1.59□□□□□ -2.15
COPS3-217ENST00000583160 H3BSA7 217 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 CLOCKO15516 846 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 TCF21O43680 179 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 OR2T1O43869 369 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 RAMP3O60896 148 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 DBIP07108 87 aaKnown RBP1.59□□□□□ -2.15
COPS3-217ENST00000583160 BPGMP07738 259 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 GNAO1P09471 354 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 TFPTP0C1Z6 253 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 OR4A8P0C604 315 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 CECR9P0C854 216 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 GPX2P18283 190 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ATP6V1C1P21283 382 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ALDH3A1P30838 453 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 CHI3L1P36222 383 aaPredicted RBP1.59□□□□□ -2.15
COPS3-217ENST00000583160 TGFBR1P36897 503 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 PPT1P50897 306 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 POLR2HP52434 150 aaKnown RBP1.59□□□□□ -2.15
COPS3-217ENST00000583160 PRRX1P54821 245 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 BPIFB3P59826 476 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 SNRPD2P62316 118 aaKnown RBP1.59□□□□□ -2.15
COPS3-217ENST00000583160 MRPS25P82663 173 aaKnown RBP1.59□□□□□ -2.15
COPS3-217ENST00000583160 FADDQ13158 208 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 STX5Q13190 355 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 UAP1Q16222 522 aaPredicted RBP1.59□□□□□ -2.15
COPS3-217ENST00000583160 HIST3H3Q16695 136 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 IMPG1Q17R60 797 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 EXOC3L2Q2M3D2 409 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ZNF181Q2M3W8 571 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 CCNJQ5T5M9 372 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 MRPL2Q5T653 305 aaKnown RBP1.59□□□□□ -2.15
COPS3-217ENST00000583160 CLEC6AQ6EIG7 209 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ZFP1Q6P2D0 407 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 NUDCD3Q8IVD9 361 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 C10orf107Q8IVU9 208 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 IFT20Q8IY31 132 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 KRTCAP2Q8N6L1 136 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 CCNYL1Q8N7R7 359 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 CEP112Q8N8E3 955 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ANKFN1Q8N957 763 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 OR9K2Q8NGE7 335 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 OR5D16Q8NGK9 328 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 OR1P1Q8NH06 330 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 CREB3L1Q96BA8 519 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ROPN1LQ96C74 230 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 DDIT4LQ96D03 193 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 PKNOX2Q96KN3 472 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 SORT1Q99523 831 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 SH3GL3Q99963 347 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 RHOXF2Q9BQY4 288 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 TMEM43Q9BTV4 400 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 EBPLQ9BY08 206 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 C20orf27Q9GZN8 174 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 OR51I1Q9H343 314 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 TMEM38AQ9H6F2 299 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 ACTR3BQ9P1U1 418 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 CLEC4AQ9UMR7 237 aa1.59□□□□□ -2.15
COPS3-217ENST00000583160 WNK1Q9H4A3 2382 aa1.59□□□□□ -2.16
COPS3-217ENST00000583160 TENM1Q9UKZ4 2725 aa1.59□□□□□ -2.16
COPS3-217ENST00000583160 TRRAPQ9Y4A5 3859 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 IGKV1D-42A0A075B6H8 117 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 IGHV3-15A0A0B4J1V0 119 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 A0A0B4J2E0 115 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 A0A1B0GX12 115 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 ATP6V1G2-DDX39BF2Z307 99 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 M0R233 179 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 COPEO14579 308 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 AIM2O14862 343 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 PEX11AO75192 247 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 SNNO75324 88 aaPredicted RBP1.58□□□□□ -2.16
COPS3-217ENST00000583160 KRT75O95678 551 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 IGHV2-5P01817 119 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 HLA-DQA1P01909 254 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 SHBGP04278 402 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 SERPINE1P05121 402 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 SERPINA5P05154 406 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 IL6P05231 212 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 ERCC1P07992 297 aaPredicted RBP1.58□□□□□ -2.16
COPS3-217ENST00000583160 MSMBP08118 114 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 MMP7P09237 267 aaPredicted RBP1.58□□□□□ -2.16
COPS3-217ENST00000583160 ASAH2BP0C7U1 165 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 LINC00032P0C843 101 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 UBTFL6P0CB48 400 aaPredicted RBP1.58□□□□□ -2.16
COPS3-217ENST00000583160 OR12D1P0DN82 309 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 ZNF43P17038 809 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 CXCR1P25024 350 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 CRYBB2P43320 205 aa1.58□□□□□ -2.16
COPS3-217ENST00000583160 IDH2P48735 452 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms