RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 KLHDC1Q8N7A1 406 aa10.08□□□□□ -0.8
SMARCE1-218ENST00000582955 RTN4IP1Q8WWV3 396 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-218ENST00000582955 PTX4Q96A99 478 aa10.08□□□□□ -0.8
SMARCE1-218ENST00000582955 CITED1Q99966 193 aa10.08□□□□□ -0.8
SMARCE1-218ENST00000582955 ABHD14AQ9BUJ0 271 aa10.08□□□□□ -0.8
SMARCE1-218ENST00000582955 Q9N2K0 584 aa10.08□□□□□ -0.8
SMARCE1-218ENST00000582955 MGAT4AQ9UM21 535 aa10.08□□□□□ -0.8
SMARCE1-218ENST00000582955 FAM90A9PA6NNJ1 464 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 RAB27BO00194 218 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 HSPA12AO43301 675 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 TXNL1O43396 289 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 AIREO43918 545 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 YPEL1O60688 119 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 IGKV1D-33P01593 117 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 IGKV1-33P01594 117 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 HIST1H1DP16402 221 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 VDAC2P45880 294 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 LSM3P62310 102 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 ARFRP1Q13795 201 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 ABCA11PQ4W5N1 156 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 IDNKQ5T6J7 187 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 STEAP3Q658P3 488 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 Q6ZS46 218 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 THNSL2Q86YJ6 484 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 Q8N2B8 174 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 OR2AK2Q8NG84 335 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 LGALS14Q8TCE9 139 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 ST6GALNAC6Q969X2 333 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 YIPF6Q96EC8 236 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 YPEL2Q96QA6 119 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 SLC23A1Q9UHI7 598 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 MOB4Q9Y3A3 225 aa10.07□□□□□ -0.8
SMARCE1-218ENST00000582955 SH2D7A6NKC9 451 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 MFNGO00587 321 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 SCTP09683 121 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 TGFBR1P36897 503 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 TALDO1P37837 337 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 ZNF137PP52743 207 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 TMEM95Q3KNT9 176 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 C9orf152Q5JTZ5 239 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 C11orf44Q8N8P7 122 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 SERTAD4Q9NUC0 356 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 OR1A1Q9P1Q5 309 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 KCNK7Q9Y2U2 307 aa10.06□□□□□ -0.8
SMARCE1-218ENST00000582955 TRIM64CA6NLI5 447 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 SERPINE3A8MV23 424 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 TRDCB7Z8K6 153 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 M0QZK8 103 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 ST8SIA5O15466 376 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 LANCL1O43813 399 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 FCGR3AP08637 254 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 ZBTB25P24278 435 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 HERPUD1Q15011 391 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 ARL6IP1Q15041 203 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 LY6G6FQ5SQ64 297 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 IZUMO1Q8IYV9 350 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 OR2T10Q8NGZ9 312 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 RHBDL2Q9NX52 303 aa10.05□□□□□ -0.8
SMARCE1-218ENST00000582955 SAA2-SAA4A0A096LPE2 208 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 ZNF736B4DX44 427 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 M0QZ24 198 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 FABP7O15540 132 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 SCGNO76038 276 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 AMY1AP04745 511 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 AMY2AP04746 511 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 SAA2P0DJI9 122 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 CD1BP29016 333 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 CEACAM6P40199 344 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 OR3A3P47888 321 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 KIR2DS1Q14954 304 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 CDNFQ49AH0 187 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 PRR31Q5SQ13 230 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 HIST2H2BDQ6DRA6 164 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 ODF3L1Q8IXM7 274 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 OR5H6Q8NGV6 325 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 EDARADDQ8WWZ3 215 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 MAFIPQ8WZ33 124 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 PHF21AQ96BD5 680 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 EAF1Q96JC9 268 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 FUNDC2Q9BWH2 189 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 PARP12Q9H0J9 701 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 IFI27L2Q9H2X8 130 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 ZNF230Q9UIE0 474 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 ETV7Q9Y603 341 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 FBN3Q75N90 2809 aa10.04□□□□□ -0.8
SMARCE1-218ENST00000582955 NCBP2LA6PVI3 153 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 BET1O15155 118 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 MOSP00540 346 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 SMIM18P0DKX4 95 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 SCAND1P57086 179 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 LSAMPQ13449 338 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 EBI3Q14213 229 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 ZNF833PQ6ZTB9 187 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 CROCCP3Q8IVE0 287 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 C5orf56Q8N8D9 126 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 OR4A4PQ8NGN8 299 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 ABHD14BQ96IU4 210 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 S1PR3Q99500 378 aa10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 MRPL20Q9BYC9 149 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-218ENST00000582955 PIPOXQ9P0Z9 390 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms