RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 CLDN15P56746 228 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 CARD18P57730 90 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 FGF12P61328 243 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 SLC38A11Q08AI6 406 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 PCOLCEQ15113 449 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF324BQ6AW86 544 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 GUSBP11Q6P575 273 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 BEND2Q8NDZ0 799 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 TAF15Q92804 592 aaKnown RBP eCLIP8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 IL22RA2Q969J5 263 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 TMEM18Q96B42 140 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 PSMG3Q9BT73 122 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 OR2W1Q9Y3N9 320 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 R4GN57 208 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 NCKAP5O14513 1909 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF25P17030 456 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 CD33P20138 364 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 BTF3P20290 206 aaKnown RBP8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 CEACAM6P40199 344 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 WNT5AP41221 380 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 PSMB3P49720 205 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 RAC1P63000 192 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 HBG1P69891 147 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 HBG2P69892 147 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 OR2T10Q8NGZ9 312 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 CPT1CQ8TCG5 803 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 OR51B6Q9H340 312 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 C1QTNF9BB2RNN3 333 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 B4E171 279 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 CLDN1O95832 211 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 COX5BP10606 129 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 TSPAN7P41732 249 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 CCL7P80098 99 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 FAM78BQ5VT40 261 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 TMEM256Q8N2U0 113 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 TMEM68Q96MH6 324 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 DOCK7Q96N67 2140 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 GPR35Q9HC97 309 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 OCIAD1Q9NX40 245 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 RNF150Q9ULK6 438 aa8.13□□□□□ -1.11
PPP4R1-222ENST00000582594 A0A1W2PQM1 296 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 A6NNC1 897 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF705FA8MVS1 300 aaPredicted RBP8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 PAGE4O60829 102 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 WDR1O75083 606 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF705DP0CH99 300 aaPredicted RBP8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF705BP0CI00 300 aaPredicted RBP8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 SERF2P84101 59 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 RNPS1Q15287 305 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 KRTAP27-1Q3LI81 207 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 TRIM61Q5EBN2 209 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 ACTL10Q5JWF8 245 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 CST9LP1Q5W188 147 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 BTNL3Q6UXE8 466 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 Q6ZS49 121 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 MKXQ8IYA7 352 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 ABHD3Q8WU67 409 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 PSMF1Q92530 271 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 ACY3Q96HD9 319 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 FRYLO94915 3013 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 CEP192Q8TEP8 1941 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF716A6NP11 495 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 NUPR1O60356 82 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 TRAPPC6AO75865 159 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 CRYAAP02489 173 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 RPL29P47914 159 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 IQCJQ1A5X6 159 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 TGIF2LYQ8IUE0 185 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF845Q96IR2 970 aaPredicted RBP8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 FKBP11Q9NYL4 201 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 OR6C3Q9NZP0 311 aa8.12□□□□□ -1.11
PPP4R1-222ENST00000582594 FREM2Q5SZK8 3169 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 IGHV5-10-1A0A0J9YXX1 117 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 C5orf49A4QMS7 147 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 CTXN2P0C2S0 81 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 SSR4P51571 173 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 RAC3P60763 192 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 RAB4BP61018 213 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF705AQ6ZN79 300 aaPredicted RBP8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 MRPL21Q7Z2W9 205 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 OR10G9Q8NGN4 311 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 OR10G7Q8NGN6 311 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 PINX1Q96BK5 328 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 CCDC74BQ96LY2 380 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 AGMATQ9BSE5 352 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF552Q9H707 407 aaPredicted RBP8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 FSCN3Q9NQT6 498 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 IL17BQ9UHF5 180 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF391Q9UJN7 358 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 POLR3KQ9Y2Y1 108 aaPredicted RBP8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 IGHV3-64DA0A0J9YX35 117 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 A0A0U1RQK1 487 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 ZNF320A2RRD8 509 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 PGPEP1LA6NFU8 196 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 M0R143 59 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 RFPL3SP0C7P2 107 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 CNN1P51911 297 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 UBE2G2P60604 165 aa8.11□□□□□ -1.11
PPP4R1-222ENST00000582594 PCBD1P61457 104 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms