RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 PRSS53Q2L4Q9 553 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 TCTE3Q8IZS6 198 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 C10orf111Q8N326 155 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 SLC2A9Q9NRM0 540 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 CEP250Q9BV73 2442 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 PPP1R2P9O14990 202 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 TGOLN2O43493 480 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 PPP1R1AQ13522 171 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 LY6EQ16553 131 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 TOR2AQ5JU69 321 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 SLC35E4Q6ICL7 350 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 BAGE3Q86Y29 109 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 BAGE2Q86Y30 109 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 LURAP1Q96LR2 239 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 DLL3Q9NYJ7 618 aa8.76□□□□□ -1.01
MSI2-209ENST00000579483 ZNF705FA8MVS1 300 aaPredicted RBP8.75□□□□□ -1.01
MSI2-209ENST00000579483 ZNF705DP0CH99 300 aaPredicted RBP8.75□□□□□ -1.01
MSI2-209ENST00000579483 ZNF705BP0CI00 300 aaPredicted RBP8.75□□□□□ -1.01
MSI2-209ENST00000579483 ATP5IP56385 69 aaPredicted RBP8.75□□□□□ -1.01
MSI2-209ENST00000579483 CTF1Q16619 201 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 C11orf87Q6NUJ2 197 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 FDX2Q6P4F2 183 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 ZNF645Q8N7E2 425 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 PLSCR4Q9NRQ2 329 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 FAM206AQ9NX38 181 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 TGFBR3LH3BV60 316 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 BMPR1BO00238 502 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 FCGR3AP08637 254 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 CDC34P49427 236 aaPredicted RBP8.75□□□□□ -1.01
MSI2-209ENST00000579483 MIDNQ504T8 468 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 SMIM7Q9BQ49 75 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 MRPL22Q9NWU5 206 aaKnown RBP8.75□□□□□ -1.01
MSI2-209ENST00000579483 U3KQ87 197 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 TRIM77I1YAP6 450 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 BCL2L11O43521 198 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 SLC25A16P16260 332 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 MFAP4P55083 255 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 ZNF439Q8NDP4 499 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 OR52M1Q8NGK5 317 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 TMED6Q8WW62 240 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 COL4A6Q14031 1691 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 TRAV8-7A0A075B6U6 113 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 TRBV5-5A0A0J9YX44 114 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 IQCF6A8MYZ5 107 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 UBE2L3P68036 154 aaKnown RBP8.75□□□□□ -1.01
MSI2-209ENST00000579483 RELQ04864 619 aaPredicted RBP8.75□□□□□ -1.01
MSI2-209ENST00000579483 EGR4Q05215 589 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 OR5C1Q8NGR4 320 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 LILRB4Q8NHJ6 448 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 KLHDC2Q9Y2U9 406 aa8.75□□□□□ -1.01
MSI2-209ENST00000579483 PPP5D1E7EU14 171 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 ONECUT2O95948 504 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 CDKN1AP38936 164 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 PPOXP50336 477 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 LCN2P80188 198 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 GAMTQ14353 236 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 SNAI3Q3KNW1 292 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 SSX7Q7RTT5 188 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 VSIG4Q9Y279 399 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 IGKV3D-15A0A087WSY6 115 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 POM121CA8CG34 1229 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 F5H697 171 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 ACAA1P09110 424 aaPredicted RBP8.74□□□□□ -1.01
MSI2-209ENST00000579483 P2RY1P47900 373 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 RPL30P62888 115 aaKnown RBP8.74□□□□□ -1.01
MSI2-209ENST00000579483 USF2Q15853 346 aaPredicted RBP8.74□□□□□ -1.01
MSI2-209ENST00000579483 C1orf100Q5SVJ3 147 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 PRR27Q6MZM9 219 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 GVQW1Q8N7I0 195 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 MDS2Q8NDY4 140 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 EEF1AKMT3Q96AZ1 226 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 DEPPQ9NTK1 212 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 MBPP02686 304 aaPredicted RBP8.74□□□□□ -1.01
MSI2-209ENST00000579483 KLF9Q13886 244 aaPredicted RBP8.74□□□□□ -1.01
MSI2-209ENST00000579483 TMEM123Q8N131 208 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 TPRX1Q8N7U7 411 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 ZIC4Q8N9L1 334 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 C1QTNF5Q9BXJ0 243 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 CTDSP1Q9GZU7 261 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 SPCS3P61009 180 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 HAGHQ16775 308 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 RPEL1Q2QD12 228 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 C10orf113Q5VZT2 155 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 PRSS54Q6PEW0 395 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 PIP4P1Q86T03 277 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 RPUSD4Q96CM3 377 aaKnown RBP8.74□□□□□ -1.01
MSI2-209ENST00000579483 RAX2Q96IS3 184 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 RHOVQ96L33 236 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 PRSS22Q9GZN4 317 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 SPRR3Q9UBC9 169 aa8.74□□□□□ -1.01
MSI2-209ENST00000579483 hCG_38984A0A1B0GV85 526 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 A0A1W2PPE3 182 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 NPIPB11E5RHQ5 1161 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 INHBBP09529 407 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 HLA-GP17693 338 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 NCCRP1Q6ZVX7 275 aaPredicted RBP8.73□□□□□ -1.01
MSI2-209ENST00000579483 FAM122BQ7Z309 247 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 POC1AQ8NBT0 407 aa8.73□□□□□ -1.01
MSI2-209ENST00000579483 TMEM165Q9HC07 324 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms