RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 CEACAM3P40198 252 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 OR3A3P47888 321 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 RORCP51449 518 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 AANATQ16613 207 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 TMEM30BQ3MIR4 351 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 AWAT1Q58HT5 328 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 Q6ZSV7 163 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 GVQW1Q8N7I0 195 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 RAB2BQ8WUD1 216 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 YPEL2Q96QA6 119 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 ST6GALNAC5Q9BVH7 336 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 ABCG5Q9H222 651 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 AUNIPQ9H7T9 357 aa17.41■□□□□ 0.38
CDC42EP4-203ENST00000578516 ZNF736B4DX44 427 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 BET1O15155 118 aa17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 RAG2P55895 527 aa17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 TAS2R20P59543 309 aa17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 C8orf31Q8N9H6 132 aa17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 PHF21AQ96BD5 680 aa17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 KCTD12Q96CX2 325 aaKnown RBP17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 ABHD14BQ96IU4 210 aa17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 SIGLEC9Q9Y336 463 aa17.4■□□□□ 0.38
CDC42EP4-203ENST00000578516 IGHV1-3A0A0C4DH29 117 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 SH2D7A6NKC9 451 aaPredicted RBP17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 HSPA12AO43301 675 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 SCGNO76038 276 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 CRYBA1P05813 215 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 SNRNP70P08621 437 aaKnown RBP17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 ELK1P19419 428 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 DYNLT3P51808 116 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 TMBIM6P55061 237 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 MOB3BQ86TA1 216 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 DYNC2LI1Q8TCX1 351 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 CAPSLQ8WWF8 208 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 RTN4IP1Q8WWV3 396 aaPredicted RBP17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 CABLES2Q9BTV7 478 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 RBM38Q9H0Z9 239 aaKnown RBP17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 DIABLOQ9NR28 239 aa17.39■□□□□ 0.37
CDC42EP4-203ENST00000578516 SAA2-SAA4A0A096LPE2 208 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 TMEM127O75204 238 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 SAA2P0DJI9 122 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 ZNF182P17025 639 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 DTYMKP23919 212 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 CEACAM6P40199 344 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 ZNF816Q0VGE8 651 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 HABP2Q14520 560 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 PNLIPRP3Q17RR3 467 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 Q3ZCU0 254 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 RPL39P5Q59GN2 51 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 TMEM69Q5SWH9 247 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 STEAP3Q658P3 488 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 Q6ZS46 218 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 OR2AK2Q8NG84 335 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 OR4A4PQ8NGN8 299 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 CREB3L1Q96BA8 519 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 MRPL20Q9BYC9 149 aaKnown RBP17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 C11orf54Q9H0W9 315 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 RDH8Q9NYR8 311 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 RNF150Q9ULK6 438 aa17.38■□□□□ 0.37
CDC42EP4-203ENST00000578516 DNHD1Q96M86 4753 aa17.37■□□□□ 0.37
CDC42EP4-203ENST00000578516 XRCC3O43542 346 aa17.37■□□□□ 0.37
CDC42EP4-203ENST00000578516 ZNF137PP52743 207 aa17.37■□□□□ 0.37
CDC42EP4-203ENST00000578516 HNF4GQ14541 408 aa17.37■□□□□ 0.37
CDC42EP4-203ENST00000578516 S100A16Q96FQ6 103 aaKnown RBP17.37■□□□□ 0.37
CDC42EP4-203ENST00000578516 MIXL1Q9H2W2 232 aa17.37■□□□□ 0.37
CDC42EP4-203ENST00000578516 MGAT4AQ9UM21 535 aa17.37■□□□□ 0.37
CDC42EP4-203ENST00000578516 A0A0A6YYH2 397 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 CCDC160A6NGH7 325 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 A6NJ64 397 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 OOSP1A8MZH6 123 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 NOL3O60936 208 aaKnown RBP17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 RGS11O94810 467 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 IGKV1D-33P01593 117 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 IGKV1-33P01594 117 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 GAPDHP04406 335 aaKnown RBP17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 IL3RAP26951 378 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 MNDAP41218 407 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 KIR2DS4P43632 304 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 RAB7AP51149 207 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 KIR2DS1Q14954 304 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 ARL6IP1Q15041 203 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 RNASE12Q5GAN4 147 aaKnown RBP17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 OR8H3Q8N146 312 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 C5orf30Q96GV9 206 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 STAB1Q9NY15 2570 aa17.36■□□□□ 0.37
CDC42EP4-203ENST00000578516 TRBV6-7A0A0A0MS04 114 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 FAM25AB3EWG3 89 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 FAM25CB3EWG5 89 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 FAM25GB3EWG6 89 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 J3QRK9 145 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 NDUFA7O95182 113 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 APOA1P02647 267 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 ZBTB25P24278 435 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 BRS3P32247 399 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 LINC00205P59089 165 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 SRSF4Q08170 494 aaKnown RBP17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 HES1Q14469 280 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 TMEM95Q3KNT9 176 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 HIST2H2BDQ6DRA6 164 aa17.35■□□□□ 0.37
CDC42EP4-203ENST00000578516 CCDC144NLQ6NUI1 221 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms