RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 CD69Q07108 199 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ADIRFQ15847 76 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM41BQ5BJD5 291 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 LYPD4Q6UWN0 246 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 Q6ZN92 141 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM182Q6ZP80 229 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RHOUQ7L0Q8 258 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 OVCH2Q7RTZ1 564 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 APCDD1LQ8NCL9 501 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF486Q96H40 463 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 MIEN1Q9BRT3 115 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SRXN1Q9BYN0 137 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RTN4RQ9BZR6 473 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CHST5Q9GZS9 411 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CACNG5Q9UF02 275 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 OR51B2Q9Y5P1 312 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CHCHD2Q9Y6H1 151 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 FER1L6Q2WGJ9 1857 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 KMT2EQ8IZD2 1858 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SHROOM3Q8TF72 1996 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A0G2JNJ9 132 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TAAR5O14804 337 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TCAPO15273 167 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 XRCC3O43542 346 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SOX15O60248 233 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 IGKV1D-33P01593 117 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 IGKV1-33P01594 117 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RPL7P18124 248 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CRYGSP22914 178 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 LMO1P25800 156 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 PTBP1P26599 531 aaKnown RBP eCLIP2.51□□□□□ -2.013e-54■■■■■ 82.8
SMCHD1-203ENST00000577880 G6PCP35575 357 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 MMP16P51512 607 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SELENOTP62341 195 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF90Q03938 601 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SLC38A11Q08AI6 406 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ENDOGQ14249 297 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 C3orf36Q3SXR2 165 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 MESTQ5EB52 335 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SPANXN1Q5VSR9 72 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 PIP4P1Q86T03 277 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 BAGE3Q86Y29 109 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 BAGE2Q86Y30 109 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RHOVQ96L33 236 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 AUNIPQ9H7T9 357 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TNFRSF12AQ9NP84 129 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 FLRT3Q9NZU0 649 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 Q9UFV3 132 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 DOPEY1Q5JWR5 2465 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 DOCK8Q8NF50 2099 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TRAV39A0A0B4J263 110 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A0U1RQV5 110 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 C3orf85A0A1B0GTC6 90 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 UBE2L5PA0A1B0GUS4 154 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RPL36A-HNRNPH2H7BZ11 118 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 GEMIN2O14893 280 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNHIT1O43257 154 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 JTBO76095 146 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHV3-11P01762 117 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHA1P01876 353 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHA2P01877 340 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 HBZP02008 142 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 APOC3P02656 99 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RD3LP0DJH9 198 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 S100A11P31949 105 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RPL13AP40429 203 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ETV1P50549 477 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RPS27AP62979 156 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 UBA52P62987 128 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 LDLRAD2Q5SZI1 272 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 C10orf113Q5VZT2 155 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 HCP5Q6MZN7 132 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZAR1Q86SH2 424 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 BIVMQ86UB2 503 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TCTEX1D1Q8N7M0 179 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SLC26A10Q8NG04 563 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SGMS2Q8NHU3 365 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 HGDQ93099 445 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 C2orf50Q96LR7 162 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 PACRGQ96M98 296 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF488Q96MN9 340 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 LINC01587Q99440 93 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CDCA4Q9BXL8 241 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 FGF20Q9NP95 211 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RPS10P5Q9NQ39 176 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM167BQ9NRX6 74 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 JPT1Q9UK76 154 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 OR2W1Q9Y3N9 320 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CHST2Q9Y4C5 530 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 IGKV3D-11A0A0A0MRZ8 115 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 LYNX1G3V0Z9 82 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 H0Y8G0 127 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 OIP5O43482 229 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 KLF7O75840 302 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 NEURL1O76050 574 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 OR2H2O95918 312 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 IGKV3-20P01619 116 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 CRPP02741 224 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 IGKV3-11P04433 115 aa2.5□□□□□ -2.01
SMCHD1-203ENST00000577880 GPX1P07203 203 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms